Bombus pyrosoma: 122566335
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Entry
122566335 CDS
T07776
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122566335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122566335
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122566335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
122566335
NCBI-ProteinID:
XP_043579377
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Position
LG3:complement(1377786..1381872)
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AA seq
621 aa
AA seq
DB search
MSFGTGFGGTTSTPAPAFSFGATASTTATPVKPAGFGTPSFGFSTPATSAPSLFGSSSTP
ATGGFGSGTTFGTPAATGFGNTATGGFASAPTFAASGTSFGTTPVFGTPASSGTAFGTTS
TFGSTPASTTGFGAFGTTTTSSLGFGGFSGFGTTTTTSAPSLFGGFGTTSTAPTFGTSTG
FGAFGTKPTATTTTTGFGGFGTGTGFTGFGSGLAQNQQQFQQQQQQPQPANTISEALYNA
VFNCQLYNDERDNIIARWNLIQALWGTGKAYYYMNAPPIELNQENPLCRFKAIGYSRMPD
ADNNDGLVVLCFNKKKKDVKEGEAQLIGFMNNILGNKPNLSLTIDNIKATGEDKSQVTIF
ITEKGITGAPRKIPASELVAYLSQPMQKQQLVQNGVEDMLPLVKLDPAQLKEYLDNPPCS
IDPRLWKQAQLDNPNPELYIPVPMIGFQQVKHRLKCQEEETTRHRNFLDMAADEIQRLQR
QHTAIQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFESMHSQVSA
PTQFKGRISEMLSQLRMRNHIDTQNQERYAMDPIAQDDIKAYLTMEQQGMAQLIATINSD
LESLKIIKDGMSELLMSHNIS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtacgggattcggaggaacaacttcgacacccgctcctgcgtttagcttt
ggtgcaacggcttccactacggcgacaccagtaaaaccagcaggatttggaacgccatct
ttcggatttagtacgccagctacctcagcaccaagtctcttcggttcctcttcaactcca
gcaacaggaggatttggaagtggtaccacttttggtacaccagctgcaactggttttggt
aacacagcaacaggtggttttgcctcggcacctacttttgctgcttctggtactagtttt
ggaactactccggtgtttggcacacctgcttcatcgggcactgcattcggcaccacttct
acttttggtagcacaccagcctctaccactggattcggtgcatttggaaccactacaacg
tcctctttaggcttcggtggtttcagtggatttggaactacaacaaccacctctgcgcct
tccctttttgggggatttggtactacaagtacagcccccacttttggtacatctacaggt
tttggtgctttcggcacaaaaccaacggcaacaactacaaccactggcttcggcggtttt
ggtacaggcacaggatttacggggtttggatctgggttagcgcagaatcaacaacagttt
cagcaacaacaacagcaaccacagcccgctaataccatatccgaagcgttatacaatgcc
gtatttaattgccagttatataacgatgaacgtgacaatattatcgcgagatggaacctc
atacaagctttatggggaactggaaaagcgtattattatatgaatgctccacctatagag
cttaatcaagaaaatccactatgtagattcaaagctatcgggtacagtcggatgcccgat
gctgataacaacgacggtctggtcgtactttgtttcaataaaaagaaaaaagatgttaaa
gagggcgaagcacaattgatcggttttatgaataatattttgggaaataaacctaactta
tcgcttacaatagacaatatcaaagcaaccggagaagacaaaagtcaggtgaccattttt
atcactgaaaaaggaattactggagctccaagaaaaatccctgccagcgagttagttgcg
tatttatcgcaaccgatgcagaagcaacaattagtgcaaaatggtgtagaagatatgtta
cctttagtgaaattagatcccgcgcagcttaaggaatacttggacaatccgccttgttcg
atcgatccacgattatggaagcaggctcaactggacaatcccaatccagaactttatata
cctgtgccaatgatcggcttccaacaagttaaacacaggttaaagtgtcaagaagaagaa
acaacgaggcacagaaatttcctagacatggcggctgatgaaatacaaagattacagaga
caacatacggcgatacaagctagattaaaggaacatcggaggactctgttagaactacaa
cacagggtgttgcaggtactggtacgtcaagaaattacacgtaaagttgggttgtccctg
caaccggaggaagaagttctaacacgtaggttcgaatctatgcattcccaagttagcgcc
ccaacgcagttcaaaggtagaattagtgaaatgctttctcaattgagaatgagaaatcat
atagacacacaaaatcaggaaaggtatgcgatggaccccatagcacaggatgacataaaa
gcgtatctaacaatggagcaacagggcatggcacaacttatagcaacgataaactccgat
ctagaaagtttgaaaattattaaagacggcatgtctgaactcttaatgagtcataatata
tcgtga
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