Bombus pyrosoma: 122566341
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Entry
122566341 CDS
T07776
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03030
DNA replication
bpyo03410
Base excision repair
bpyo03420
Nucleotide excision repair
bpyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122566341
03410 Base excision repair
122566341
03420 Nucleotide excision repair
122566341
03430 Mismatch repair
122566341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpyo03032
]
122566341
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122566341
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122566341
DNA replication proteins [BR:
bpyo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122566341
DNA Replication Termination Factors
ELG1-RFC complex
122566341
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122566341
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122566341
Check point factors
HRAD17(Rad24)-RFC complex
122566341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
Rad17
AAA_14
AAA_16
AAA_24
Mg_chelatase
Viral_helicase1
AAA_11
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_18
AAA_28
AAA_5
DEAD
NTPase_1
ABC_tran
DNAX_ATPase_lid
MeaB
MCM
AAA_23
AAA_2
RNA_helicase
AAA_25
AAA_3
AAA_30
Motif
Other DBs
NCBI-GeneID:
122566341
NCBI-ProteinID:
XP_043579388
LinkDB
All DBs
Position
LG3:complement(15451903..15453754)
Genome browser
AA seq
351 aa
AA seq
DB search
MGVENTVGEPMNVEAVPSTSGYSVKNKEKDKKSGNLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPVFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSENVFKVCDEPHPLLVKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLISNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQKTMQK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgagaatactgtcggtgaacctatgaatgttgaagctgtgccatcgacgagt
ggttatagtgtaaaaaataaagaaaaagataagaaatcaggcaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattatcattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagtgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgttgtcagaaataaaatt
aaaatgtttgcccaaaagagggtaaatttggcaaaaggaaagcacaaaataataattctg
gatgaagctgatagcatgactgatggtgcgcaacaagcattacgtaggacaatggagata
tatagcaatacaactaggtttgcactagcttgtaatacaagtgaaaaaattatcgagcca
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgagaatgtttttaaagtttgtgacgaaccacatccg
ttacttgttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggaacatttatggaaaatgggatattctgcagaagatttgatcagtaatatattc
agagtttgtacaaatctatccatcgaagagccattaaaattagattttataaaagagatt
ggaataactcatctaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaaaaactatgcagaagtaa
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