Bombus pyrosoma: 122566471
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Entry
122566471 CDS
T07776
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03008
Ribosome biogenesis in eukaryotes
bpyo03013
Nucleocytoplasmic transport
bpyo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122566471
03015 mRNA surveillance pathway
122566471
03008 Ribosome biogenesis in eukaryotes
122566471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122566471
03009 Ribosome biogenesis [BR:
bpyo03009
]
122566471
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122566471
mRNA cycle factors
Stress granule specific factors
122566471
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122566471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
122566471
NCBI-ProteinID:
XP_043579706
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All DBs
Position
LG1:847473..850748
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AA seq
648 aa
AA seq
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MPKKSNKPQWGGRGGRPGNFDEKHYFGHDDRVPRNDRGSYLGNRPRVSFKTQARPTRDVP
RSLTLACLDEDVQMATSSNNNNNNRQVIMTGRNRRTQRGRNSPVPHRRYRTSLVPRPKRF
PMGDTNWYKITIPYGQKYDKDYIINNLLSYIAPETFVPIMYRVFGNEANFYVDDEKIAVA
LLDCDRKITTTDGYKLLVRVSKSPFPQCEIDAKLKERLKQAMAKRYTHATNALDLSRFHR
DPDLVSDYFCALFQPAILKAVLDIVSEYIPDLEALNFDGNKLQTIQNLNILNRKFLKLKI
LYIGDNRIKDINQLDIIKDLKLEELKLAGNPICNKYKSRQSDYISDVRKRFPKLLRLDGM
DLPKPILFDVVDEGNKIPPSQRMFVANTKAQEVASQFLQQYFLIFDSENRQPLLDAYVEH
ACFSMTVSYPPHYTNKLNGYLMENRNLMENKNLMDNRNLYRINDTNRRQKLLKHGRLPVV
SFISEMPQTSHYLNTFTMDISLITDGIMLTTVTGLFKELDKKEQPIRYFNRTFIIVPEGN
GYCIRNEQLHISQPTDAQLKQLNSQPQAQMTDPGSQTPSISGNEKSLTVQLPEDVKQQMT
MTLSQQTNMNLEWSLKCLEEVSWNYDNALSAFQEFYKRGQVPAEAFNK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaatcaaataaaccgcaatggggtggccgaggtggaagacctgggaatttt
gatgaaaaacactattttggacacgatgaccgtgtacccagaaatgacagaggttcatat
cttggtaataggcctagagtatcattcaaaacacaagcaagaccaacaagggatgtgcct
agaagtctaacattagcatgcttagatgaagatgtacaaatggcaacaagttccaataat
aataataataataggcaagttattatgacaggaagaaatagaaggacgcaacgtggaaga
aatagtcctgtgcctcatagaagatataggactagtttagttcctagacctaagcgattt
cctatgggagatactaattggtataaaattactataccatatggacagaaatatgataaa
gattatataataaataatcttcttagttatatagcgccagaaacttttgttccaataatg
tatcgggtttttggaaatgaagccaatttttatgtagatgatgagaaaatagcagttgcg
ttacttgattgtgatcgtaaaattacaactactgatggatacaaattattagtaagagtc
tcaaaatcaccgtttcctcagtgtgaaattgatgccaaactgaaagaaagattgaaacaa
gctatggctaaacgatatacgcatgctacaaatgcactagacttatcaaggtttcacaga
gatccagatcttgtttccgactacttttgtgcactattccaacctgcaatattgaaagca
gtgttagacattgtatcagaatacataccagatttagaggcattaaattttgatggaaat
aagttgcagacaatccaaaatttaaatattctgaatagaaaatttttaaagttaaagata
ttgtatattggagataataggataaaagatattaatcaattggatattatcaaagatctg
aaattggaggagcttaaattggcagggaaccctatatgcaacaaatataaatctcgacaa
agtgactacattagcgacgtgcggaaaaggtttcctaaactcctgcgactggatggtatg
gatctcccgaagccaatcttattcgatgtagtggacgaaggaaacaaaatacccccttct
cagaggatgtttgttgcaaatacaaaagcacaggaagttgctagtcaatttctacagcaa
tactttctcatatttgatagtgagaatcgccaaccattgctagatgcgtatgtcgaacat
gcgtgttttagcatgactgtgtcttatcctcctcactatactaacaaattaaatggatac
ctaatggaaaatagaaacctaatggaaaacaagaacctaatggacaatagaaacctgtac
agaataaacgatacaaacagaaggcagaagttattaaaacatggtcgtttgcccgtagtt
tcatttatttctgaaatgccgcaaacttcccactatctgaatacattcacaatggacatc
agcctgattacagatggaataatgttgactacagtcactggactgttcaaagagcttgac
aagaaagaacagcctattcgttactttaatcgaacctttataatagtaccggaaggaaat
ggttactgtattcgaaatgaacaactacatatcagtcaaccgacagacgcacaactaaaa
caattgaatagtcaaccacaagcgcaaatgacagatccaggatcacagactccttcgatt
agcggtaatgaaaaatcattaacggttcagttacccgaagacgtaaaacaacaaatgacg
atgacgctcagccaacaaacaaacatgaacttggaatggagtttaaagtgtttagaagaa
gtatcatggaattatgacaatgcgctttcagcgtttcaagaattttacaagcggggacaa
gtaccagcggaagcatttaataaataa
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