Bombus pyrosoma: 122566498
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Entry
122566498 CDS
T07776
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03013
Nucleocytoplasmic transport
bpyo03015
mRNA surveillance pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122566498
09122 Translation
03013 Nucleocytoplasmic transport
122566498
03015 mRNA surveillance pathway
122566498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122566498
03041 Spliceosome [BR:
bpyo03041
]
122566498
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122566498
Spliceosome [BR:
bpyo03041
]
Complex C
Other components
EJC/TREX
122566498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
122566498
NCBI-ProteinID:
XP_043579764
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Position
LG4:complement(14467732..14476333)
Genome browser
AA seq
846 aa
AA seq
DB search
MRRKSERNKAKAGSPEKEVERVTRKSTRKSAKQASSTSLEQENAEETTKSLSNKITEKKS
AHIQKKEVEQLEEQNEKVLSIEADVKTKSQEDEEDNNSGSIWKVSRSDASPGEIQRLKLS
RQHNTTEGLSDTSLNRKKSNKWQESGEGVAEEVDSADKQLVSSTRVPSSTEQPNDPSSSY
PGQDSNEEVSDSKEILPETTSANLSDDKPNIDQQGESNEANYSNENADSKPIKSTSTTIL
APSSNGNHSSEETNIMPKEEKSVEDTSEKTVEAFNKETSVENTQRDSSSDEEEDKKEKVR
ELNSSSESNDEIHTKSNRTGGRIQSASRRKHRTKYRDSSNSDTPDSEDEPSIKRDLEIDV
CMQEEKISTEDSHEQKDHTESPKVRNNFLLNNMEMEIEHCEANKQKLDNLVDKSEYTVSA
TTQLVTYKPVKVNLKRSFSSRMLTEKNDVKKEDTDANANNEASAPNKENHDSTEPDSKCI
PRKRRWGTALSTDTAPSFSISTDSLKALVPGARPLSINEVRLSKDDDEDRDRYRVSEKWH
NSNEGINDNKSGDENIMQKNGATKKGDPKIDNHIAARRKISIVKEVPHVKSPSPPATKPT
NILLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIKSKCFVEYANEDQAFETRQALHG
ISWPVSNPKRLHVEYATKDDMELARELSKDQSIPRKTEPLVPSDSWQQDWNREERTNTKV
MVVREWDLGKEDGQQHIKEKEREKKEHDKKRRQRSRSPAVEAHLPAPARKFKKKEDEPPP
AKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEHARRLEEMRRAERNNRDGRR
RRSPRK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaaaagtgaaagaaacaaagcaaaagcagggtctccagagaaagaggttgaa
cgagtaacacgaaagtcaactcgaaaaagtgcgaaacaagcatcttcaacatccttagag
caagagaatgctgaggaaacaacaaaaagtttgagcaataaaatcacggaaaaaaaatca
gcacacatacagaaaaaggaagtggaacaattagaagaacaaaatgaaaaggttttgtct
attgaagcagatgttaagaccaaatcgcaagaagatgaagaagacaacaattctggatca
atctggaaagtgtcaagatccgatgcatcacctggcgagatacagagattaaaattatct
agacagcataacacaacagaagggttatctgatacttctttaaataggaaaaaatcgaac
aagtggcaggaaagtggtgagggagttgcagaggaggttgactcggcagacaagcaactg
gtttcttctacaagagtacccagtagcactgaacagccgaacgatccctcctcttcatac
ccaggtcaggactccaacgaagaggtaagtgatagcaaggagatcctgcctgaaaccact
tcagccaacttgtctgacgataaaccaaacatagatcagcaaggtgaatcaaatgaggca
aattactccaacgaaaacgctgatagtaaacccattaagtcgactagtacaactatattg
gctcctagttcaaatggtaatcattcatccgaggagacaaacattatgcccaaggaagaa
aaatctgtggaagatactagtgaaaagacagtggaagcatttaataaagaaactagcgtt
gaaaacactcaaagagattcaagcagtgacgaggaagaagataaaaaggaaaaagttcgt
gagctaaattcatcatctgaatcaaatgatgaaattcatactaagagtaatagaactggt
ggcaggatacaaagtgccagtcgcagaaaacatcgaactaaatatcgagattcatctaat
tctgatacaccagattctgaggatgaaccttctattaaaagagatcttgaaattgatgta
tgtatgcaagaagagaaaataagtacagaggattcccacgaacagaaagatcatactgag
tcaccaaaagtaaggaataattttttattaaataacatggaaatggaaatagaacattgt
gaagcaaataaacagaagttagacaatctggttgataaatcggaatatactgtatcggca
acaactcaattggtgacttacaaaccagtgaaagtaaatttaaaaagatcattttcttcg
agaatgttaacagaaaagaatgatgttaaaaaagaagatactgatgcaaatgcaaataat
gaagcaagtgctccaaataaggaaaatcacgacagcaccgaaccagattccaaatgtatt
ccaagaaagcgtcgatggggtactgcattatctactgacaccgcaccttcgttttcaatt
tctacggattcacttaaagcgttggtgccaggagcaagaccattgtcgataaatgaggtt
cgtctttcaaaagatgacgatgaagacagggatcgttatcgagttagcgaaaagtggcac
aattctaatgaaggaataaacgataataaatccggtgacgaaaacatcatgcaaaagaat
ggtgcaacaaaaaagggagacccaaaaatagataatcatatagcagcaagacgtaagata
tcgattgttaaagaagtgccacatgtgaaatctccaagtccacctgctacaaagcccaca
aatatccttctgatcaaaaacttggttcgtccgttcactttgaatcaaattaaagaactt
ctgtcgcgtactggcacaattgtcgaaaatggattttggatggatcgaattaaatccaag
tgttttgtagagtatgctaacgaagaccaggcatttgagacgaggcaagcgttacatggt
atatcctggccagtttcaaacccaaagaggcttcatgttgagtatgcaaccaaagatgac
atggaattagcacgcgaattatcaaaggatcagtccatcccaagaaaaaccgaacctctc
gtaccgtccgattcatggcagcaggattggaatcgcgaagaaagaacgaatacaaaggtg
atggtagttcgagaatgggatcttggtaaagaagatggacagcagcatataaaagaaaaa
gaacgtgaaaagaaagaacatgataaaaagaggcgtcagaggagtcggagtcctgcagtg
gaagcacaccttccagctccagctcgtaaatttaaaaagaaagaagatgagccaccaccg
gctaagcttttagatgatctctttagaaaaacgaaagcaacgccatgcatatactggtta
ccactcacaaatgaacagatagtcgtaaaagaagaaatgagaaggcaacacatggcagaa
catgcacgcagattagaagagatgagacgcgctgaaagaaacaacagggacggtcgtcgc
cgtcgcagcccaagaaaatag
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