Bombus pyrosoma: 122566519
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Entry
122566519 CDS
T07776
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122566519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122566519
Spliceosome [BR:
bpyo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
122566519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
122566519
NCBI-ProteinID:
XP_043579847
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All DBs
Position
LG4:complement(2561938..2564418)
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AA seq
502 aa
AA seq
DB search
MATSKSGNQQKRKLVIERNNLDEEIAKKAKIIKTTSEAPRLCPYLDTINRQFLDFDFEKL
CSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIID
SSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSLYSPGIVGMNNIKANDYCNVILQAL
SHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIPPL
ELDESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFN
AVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGDI
LTPEVKQRHPFTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDLHVTQILPQMIT
LTEAYIQIYELKNDVYSENGNN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagtaaatcagggaatcaacaaaaaagaaaattagtgatagaacgaaataat
ttagatgaagaaattgccaaaaaagctaaaattataaaaacaacttcagaagctccacga
ttgtgcccttatttagatacaataaatcgccaatttttagactttgattttgaaaaacta
tgttcagtatcattgtcaaaaattaatgtatatgcttgtcttgtgtgcggaaagtacttt
caaggtagaggtacaaacactcatgcatacacacatagtgtagctgaaagtcatcatgtt
tttttaaatctacatacattaaaattttattgtttacctgacaattatgaaataatcgat
tcatcattggatgatataaaatatgttttaaatccaacatttgataaagcacagattgca
caattagataaaagtgataaattatcgagagccatagatggatcgctatattcccctggt
attgtgggaatgaataatattaaagcaaatgattattgtaatgttattttacaagcactt
tctcatgttacacctttaagagattttttcttaagagaatctaattattctcatgtcaaa
aggccacctggagattcttcttatcttttagttcaacgatttggtgaattaatgagaaaa
ttatggaatccccgtaatttcaaagctcatgtcagtccacacgaaatgttacaagctgtt
gttttatggagtaaaaagagatttcaatttactgaacagggtgatccaatcgattttctt
tcatggtttttaaatgcccttcatttagcattaaatggtacaaaaaagcgtgattctagt
atagtgtataaaacgtttttgggtcatatgcggatatatacacgaaaaataccaccactt
gaattggatgaaagtcaaagaagtgaattacttcatacagtagaatatggcgaaactgta
acagaaagcccatttttatatttgacatgtgatcttccaccaccacctcttttcaaagac
caattcactgaaaatattattcctcaagtcaatttgtacacattattgaataaatttaat
gctgtaactgaaaaagagtacaaaacatataaagaaaattttatgaagagatttgaaata
acagaacttcctccttatctcatactttatataaaaaggtttacaaagaacacattcttt
gtggaaaaaaatcccaccatagttaatttcccagttaaaaatgtagattttggagatatt
ttaacacctgaagtaaaacaaagacatccatttacaacatatgatttagtagcaaatata
gttcacgatggtgaacctggtcaaggaacgtatagagttcacattttacatagagcaact
ggtcagtggtacgagttgcaggatttacacgtaactcaaattttgccacaaatgataaca
ttaactgaagcatatatacaaatttatgaactaaaaaatgatgtatattcggaaaatggc
aacaattaa
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