Bombus pyrosoma: 122566612
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Entry
122566612 CDS
T07776
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04140
Autophagy - animal
bpyo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122566612
04148 Efferocytosis
122566612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpyo04131
]
122566612
Membrane trafficking [BR:
bpyo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122566612
Hops complex
122566612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_Vps41
TMP_4
Motif
Other DBs
NCBI-GeneID:
122566612
NCBI-ProteinID:
XP_043580076
LinkDB
All DBs
Position
LG4:11633464..11640706
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AA seq
835 aa
AA seq
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MLAMLTADWFPLGRDIYFRKFELYPLSFQDEVSSNNVLVAAPYGGSIAVTRNSKKLVKVQ
GANKPTIYLYTSSGKLTAKLQWSGGQLILLGWSQQEELLCVEDDGMVHIYDMFGTYQHAF
SMGNEVKDTKVVEAKFFVSYSGTGIAVLTSTNRIFLVNNIVEPKVRQISEIPRYGGQIEC
WCLVHCDRETRVILSNRDGIFVIHQSHQTATHIPFDNLFTRHNKVFTIVAMAVSGNNRHI
ALYTDTGHLYMGTIDFNEKYCEHYTNMKEPLENIAWCGTEAVICSWNSTVMVIGRTAETI
IYTYDGPVHLITEIDGVRVLSGSSHEMIQKVPNVVQKIFRINSTDPASYLLEASKQFQKR
SHKADSYMDLVKDKLDAAIKACIDGAGHEFDFETQKLLMRAAKFGKGFSKTINPEYYVNM
CRTLRVLNAVRHPAIGIPLTYTQFTILTSQVLLDRLVARRHYYLSIQIARHLQLPEIDGE
SRILAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIARRAADCGRKQLAIKLIDY
EPRAHQQVPLLLTLGEERAALRKAVESGNTDLVYTVILHLRENMPLGDFQMSIMHCPLAM
ALYIKYCQNHNRETLRDIYNQYDDFHSQAIWFITESYQRKNTMSREALLQSAQEHFKLAR
NDTNAALTEEQIKLLRYQRSMEDVLKKPIVGKPLQDTVKVLLLRNEYKLADKLRSEYKIS
DRRYWWLRIQCLAEQGVWNELEKFSKSKKSPIGYEPFIDQCLKYNEEREAKKYLPKVRDE
LKVKYLVKLKMMNEAVQTAIEQKDVNALTYLLGQCETTDRQLIDKINMYITSLKN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaatgttaaccgccgattggtttcctttgggtcgagacatctattttagaaaa
tttgaattgtatccattatctttccaagacgaagtatcaagtaataatgtattagtggca
gctccttatggaggttctatcgcagtcaccagaaattcgaagaaattggtgaaagttcaa
ggagcgaataagcctacgatatatttatacacatcttctggaaaactaacagccaagttg
caatggagtggtgggcaactaattcttttgggctggtctcaacaagaagaattactatgt
gtagaagacgatggcatggttcatatatatgatatgtttggtacatatcaacatgctttt
agtatgggaaacgaagtgaaagatactaaggttgtagaagcaaaattttttgtcagttac
agtggaactggtattgcagttctaacatctactaatcgtatatttctagtgaataatata
gttgaaccaaaagttaggcaaatatctgaaattcctagatatggtgggcaaattgaatgc
tggtgtttagttcattgcgatagagaaacacgtgtgatattatcgaacagagatggaata
tttgtgatacatcagtctcatcaaactgcaactcatataccatttgacaacctttttacc
agacacaataaagtgttcactatagtcgctatggcagtgtctggaaacaatcgtcatatc
gctctttatacggatactgggcatttgtacatgggtactatcgatttcaatgaaaaatat
tgtgaacattatacaaatatgaaagagcctttagaaaacatagcatggtgtggaacagaa
gctgtaatatgtagctggaacagtactgtaatggtaatcggacgaacagccgaaaccata
atatacacgtacgatggaccggtacatcttattacagagattgatggtgtacgtgtatta
tctggttcttctcatgaaatgatacaaaaagtaccgaatgtcgttcaaaaaatatttcga
attaattcaactgatcctgcgtcttatttattggaagcttctaaacagtttcaaaaaagg
agtcacaaagctgatagttacatggatttagtcaaagataaattagatgctgcaataaaa
gcttgcatcgatggagctggccatgaatttgattttgaaacacaaaagcttttaatgagg
gctgctaaatttgggaaaggatttagtaaaacaattaatcctgagtattacgtcaacatg
tgtcgaactttaagagttttaaatgcagtgaggcaccctgcaattggaattccattaaca
tatacacaattcactattctcacgagtcaagtgttattggatagactcgttgcaagaagg
cattactatctaagtatacaaattgcacggcatcttcagttaccagagatcgatggagaa
agtcgaatattagctcattgggcttgctataaagtaaaacagacgcaattagataaggaa
caaatagcagaagaaatagctgataaattaggctacgcgcctggtgtttcttatagcgaa
attgcaagaagagcagccgactgcggccgaaaacaactagcaattaaactgattgattac
gaaccacgtgcacatcaacaagtgccacttttattaacgcttggtgaagaaagagccgca
ttacgtaaagccgttgaaagtggaaataccgatttggtttataccgtaatacttcatctc
agggagaacatgccactcggtgattttcagatgtccataatgcactgtcctttagctatg
gctttatacatcaaatactgtcaaaatcataatcgagaaacacttcgcgatatttataat
caatatgatgattttcattctcaagcgatatggttcattaccgagagttatcagcgaaag
aatacgatgtcaagagaagcattattacaatctgcacaggagcatttcaagttagctcgt
aacgatactaatgcagctttgacagaagaacaaataaaattattgcgctatcaaaggtct
atggaagatgtattaaagaaaccgattgtagggaaaccacttcaggatactgtaaaagta
ttactattgcgcaatgaatacaaattagctgataaattaagatcagagtataaaatatcg
gatcgaagatattggtggttacgaatacaatgtttggccgagcagggcgtatggaacgaa
ttggaaaaattctccaaaagtaaaaaatcccctattggttatgagccttttatagaccaa
tgtttaaaatataatgaagaaagggaagcgaaaaaatatttacctaaagtaagggacgaa
ttgaaagtaaaatacttggttaaattaaaaatgatgaacgaggccgttcaaacggcgata
gaacaaaaagatgttaatgcgttaacttacttactaggtcagtgcgaaactacagatagg
caattaattgataaaattaatatgtatataacaagtcttaaaaattga
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