Bombus pyrosoma: 122567477
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Entry
122567477 CDS
T07776
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03030
DNA replication
bpyo03420
Nucleotide excision repair
bpyo03430
Mismatch repair
bpyo03440
Homologous recombination
bpyo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122567477
03420 Nucleotide excision repair
122567477
03430 Mismatch repair
122567477
03440 Homologous recombination
122567477
03460 Fanconi anemia pathway
122567477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpyo03000
]
122567477
03032 DNA replication proteins [BR:
bpyo03032
]
122567477
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122567477
Transcription factors [BR:
bpyo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122567477
DNA replication proteins [BR:
bpyo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122567477
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122567477
MMR (mismatch excision repair)
122567477
DSBR (double strand breaks repair)
HR (homologous recombination)
122567477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
IBR
Motif
Other DBs
NCBI-GeneID:
122567477
NCBI-ProteinID:
XP_043581968
LinkDB
All DBs
Position
LG5:complement(1274442..1278325)
Genome browser
AA seq
595 aa
AA seq
DB search
MYSLTEGALDKIMNGIEVDRPILQILGHKKLSSSNSGERYRLLVSDGKRINSFTMLATQL
NSMITDNVLTEFSICQINRYAISVVNNAGKQKRVMVILSVDLKVAGDEVGHKIGNPTNAD
ADGESKPAQSVQSAQTASQQQSSLMSKHSGQQSSTSDISTIPIVALSPYQNRWVIKARVV
NKSTIRTWSNSRGEGKLFSMDLVDESGEIRCTAFRDQCDKFYDMIEIGKVYYISRASLKT
ANKQFNNLKNDYEMSLTGDSEIIPCHDIGDKIPTLQFDFIPINNIEQKEKNDIIDVLAIV
KSRGDLQMLVSRTTGKDMKKRDINLIDESNTMVTLTLWGTQAEEFSGNDNPVLAIKGARV
GEFNGGKNLSTLSGTAVQVDPDIPEAHRLRGWFNTTGCHEEAKPLSRAFGSAAQMSQALI
TIGEANSQIDKKNGPEIFTVKATINLLRTENILYKSCPSENCKKKVIDQANSMYRCEKCN
KEFPNFKYRLLGSLSLADWTDNMWVTAFNDETEKILGITAQELGELKENDNDAYLEKLGD
VTFKSFIFKIRTKMETFGDENRLRSTCIDVSPTDCKAYNEDLITKLKELTGIDST
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtattcacttacggaaggagcattggataaaatcatgaacgggatcgaggtcgatagg
ccgatattgcagatattgggtcacaagaaattatctagttcaaatagtggagaacgttac
agacttctcgtatctgatggaaaacgaataaattcatttacgatgcttgccacgcaatta
aattcaatgataaccgataatgtattaacagaattttccatttgccaaataaatagatat
gctataagcgtggtaaataatgccggcaaacaaaaacgagtaatggtgatattaagtgtt
gatttaaaagttgcgggtgatgaagttggacataaaattggtaatccaacaaatgctgat
gctgatggtgaatctaaaccagcacaaagtgtacagtctgcgcaaactgcttcacaacag
caaagtagcttgatgtcaaagcatagtggtcaacagtcttctaccagtgatatatccaca
ataccaatcgttgcattaagtccttatcaaaacaggtgggtaataaaggcacgagttgtc
aataaatctaccatcagaacatggagtaactcacgtggtgaaggaaaattgttttccatg
gatcttgtagatgaaagtggggaaattagatgcactgcatttagagatcaatgtgataaa
ttctatgatatgattgagattgggaaggtttattacatttccagagcatctttaaaaaca
gcaaataagcaatttaataatttaaaaaacgattatgaaatgtctctaactggtgattca
gaaataattccgtgccatgacattggagataaaattccaactcttcagtttgattttata
ccaataaataatatagagcaaaaggagaaaaatgatataatagatgttttggctattgta
aaatctcgtggtgatttgcagatgttagtatcacgaaccactggtaaagacatgaaaaaa
agggatattaatctcattgatgaaagtaatactatggtaacacttacactatggggaaca
caagctgaagaattttcaggaaatgataatccagttttagcaattaaaggagctcgtgtt
ggcgaatttaatggtggaaagaatttgtctactctcagtggaactgctgtacaggttgat
ccagatattccagaagcacatagattacgaggttggtttaacacaactggatgtcatgaa
gaagcgaagccactttcaagagcatttggaagtgcagctcaaatgtctcaggcattgatc
acaattggcgaagcaaacagtcagatagataaaaagaacggtccggaaatatttacggtg
aaggcgaccattaatcttttacgcactgaaaatattttatataaatcgtgtcctagtgaa
aattgtaaaaaaaaggtgatcgatcaagcaaatagcatgtacaggtgcgaaaaatgtaat
aaagaattccctaacttcaaatatcgtttacttggaagcctaagcttggctgactggaca
gataatatgtgggtcacagcatttaatgacgaaacagagaaaattttaggtattacagct
caggaacttggagaattaaaagaaaatgataatgatgcttatctggaaaaacttggcgat
gtaacatttaaaagtttcatatttaagataagaacgaaaatggaaacattcggtgatgaa
aacaggttaagatcaacatgtattgatgtatccccaaccgattgtaaagcctacaacgaa
gacttaataaccaaactcaaagaattaactggtattgatagtacttaa
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