Bombus pyrosoma: 122567516
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Entry
122567516 CDS
T07776
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122567516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122567516
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122567516
U7-dependent histone pre-mRNA processing factors
122567516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
122567516
NCBI-ProteinID:
XP_043582062
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Position
LG5:10752540..10755827
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AA seq
737 aa
AA seq
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MTSIIKLHAISGAMDESPPCYILQVDELRILLDCGWDENFDQEFIKELKRHVHQIDAVLL
SYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVD
AAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKK
ERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTS
PGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSES
EDEIEVGGGRGKHDLLVKQESKPGFFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDYKIA
ETMPEVDDNKENLETKQEDTTHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGES
LQKILAQLRPRRVVLVRGSQKDTEILAQQAQSAGARVFIPGRGETLDATTETHIYQVRLT
DALVSGLNFSKGKGDSEVAWVDAMITARDQICRDAVAGTESDDVIDQSDKILTLEPLPLN
EVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCIS
EDYYKVRELLYEQYAIV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaataataaaacttcacgctatttctggggctatggatgaatctcctccttgt
tatatattgcaagttgatgaattaagaatattacttgattgtggatgggatgaaaatttt
gatcaagaatttataaaagaattaaaacgacatgttcaccaaatagatgcagtactctta
tcatatccagatccattgcatttgggtgctttaccatatctagttggaaaatgtggatta
aattgtccaatatatgctactattcctgtatataagatgggacaaatgtttatgtatgat
atgtatcagtcccgtcataatatggaagactttgatctttttacacttgatgatgttgat
gcagcatttgacaaaatagttcagttaaaatataatcaaagcatttcaatgaaaggaaaa
ggatatggagttactttaacacctttaccagctggtcacatgattgggggaaccatctgg
aaaattgtaaaagttggtgaagaagacataatatatgctgttgattttaatcacaaaaaa
gaacgacatttaaatggttgtgaattagaaagactacagagaccatctttgttaataaca
gatgctttcaatgctacttatcagcaagcaagacgtagaacaagagatgaaaaattaatg
acaaatattttacaaacattacgtggaggtggaaatgtcttggtcagtgtagatacagct
ggtcgtgtattagaattggctcatatgttggaccaattatggcgtaataaagaatctggt
ttacttgcatattctttggctcttttgaacaatgttagttacaatgtcgttgagtttgct
aagtcacaaatagaatggatgagtgataaattaatgaggagttttgaaggtgctagaaac
aatccatttcaatttaagcatttacaactatgtcacagtatggcagaattaaatcaagtt
cccagtccaaaggttgtacttgcaagtactccagatatggaatgtggtttctcaagagag
ttgtttttgcaatggtgtggtaatccccaaaacagtattatattaactagcaggacatca
ccaggaacactagcaagagatttggttgaaaagggcggtaatagaaatattacattggag
gtgaaaaggagaattaagttagaaggacttgaattagaagaatatcaaagaaaagaaaaa
ttaaagcaagagcaattgaaacaagaacaaatggagactgctgatgtaagttctgaatca
gaagatgaaatagaagttggtgggggaagaggaaaacacgatttattagtaaaacaagaa
agtaaaccaggatttttcaaacaaagtaaaaaacaacaccctatgttcccatttgtagaa
gaaaaaattaaaatcgacgaatatggagaaattataagaccagaagattataaaatagca
gaaactatgccagaagtggatgataataaagaaaatctggaaacaaaacaagaagatact
actcatcatccagaaatacccactgatatcccaacaaaatgtatccaagttacacgtaca
atgacagttaatgcatctgtcacatatatagattttgaaggtagatccgacggagaatca
ctacagaaaattttagcacaattaagaccacgaagagttgtactagttagaggatcacaa
aaggacactgaaatcctggctcaacaagcacaaagtgcaggtgcacgagtgtttattcca
gggagaggagaaacattagatgctacaacagaaacacacatataccaggttcgtttgaca
gatgcgcttgttagtggcttaaacttttcaaagggaaaaggtgattctgaggtagcatgg
gttgatgcaatgataactgctcgtgatcagatatgccgagatgctgttgcaggtaccgag
tcagatgatgtaatagatcaaagcgacaaaatacttacgttggaaccattaccattaaat
gaggtacccggccatcaaacaacatttataaacgagttaaaactatctgattttaaacag
attttgaacaaaagtaatattccttctgaatttagtggaggtgttttatggtgttgcaat
aatactatcgccgttaggaggcacgaggctggaaaagtaatattagaaggttgcatttca
gaagattattataaagtacgcgaattgttatacgaacaatacgcaattgtataa
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