Bombus pyrosoma: 122567669
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Entry
122567669 CDS
T07776
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122567669
Spliceosome [BR:
bpyo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122567669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
TPR_6
TPR_11
PPTA
NRDE-2
HAT
Motif
Other DBs
NCBI-GeneID:
122567669
NCBI-ProteinID:
XP_043582411
LinkDB
All DBs
Position
LG5:complement(6994424..7000807)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSSASGDESEITLNEPVRRTRSSRARKTTVVAKKSPVKKLLARATRSPKKVQEIEEVEEE
VPVLQEEVVMESIPENGVQRFGDIIIEQHNEEDSSMLHLELEDSSDTTIHEINMNQSVQI
EVQENVPDLETSASQIDHSNTVSDCMIIEESSMDKVDMLNEREQMDMEGQDISNDETNQR
VLIDFQEVMNDDGETITQVTEILETEEIESETVINEGTGIEVMEVDSQQETSESIENITE
KTVPDYDMTGMVEMAETTEGDMECLPENAIKKTEPDTEAVSEDELPTEATAKEPETEAVS
DEELPAAAPADLGETESVSEDELPLDSEKKKKSGTKVMSKTLEKKNKIEGTNKRKLNAEG
EYDPSSPTSENNDETPAKKVALSTEADPGDNKQETKPASPKKKTLPELEKYWKAVNEDPS
DFTGWTYLLQYVDQENDAEAAREAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFD
QGLKAISLSVDLWLHYINHCKTVYEKDEEKLREQYERAIEACGLEFRSDRLWESYIKWEL
EGKRLSRVTALYDRLLCTPTLGYISHFDAFQEFVSSNLPNRILNVDDFLALRAEVKALLK
SDDSTSTSAADDAPPGEEPPPHELPPTDEETRAIREKIISSRRKMHKANINAVAARWSYE
EGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQNRIIILFERCLIACALYDEFWMRFVR
YLESLKGDNVEKIRDVYTRACMVHHPKKPNLHLQWATFEEGQGNFEKAANILENIDNVIP
NMLQVAYRRINLERRRGDLDKACTLYENYISNSKNRTIANNIVVKYARFLCKVKSDVDKA
IKVLLKATEKDKDNPRLYLQLIDLGMQRTPVDTQEIVGYMDMFIEREHADLEQRVLFAQR
KVEFLEDFSPDIRQVLKAHEQFQKCIKQAKERKKTKNDDTKTDTSPPKKVKTGDQSNVPP
PPSVSSQSSYQYSSGPSGPYQSQQQFQSGQYGGQGGYQQGYQQYPPPSDPNYANYQNWQY
GQGGPQAYGPYNQWGSYNYY
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcaagtggtgatgaaagtgagatcactttaaatgaacccgtacgacgtaca
agatctagccgtgcacgtaaaactactgtggtagcgaaaaaatctcctgtaaagaaactt
ctagcaagagctacacgttctccgaaaaaagtgcaagagatcgaagaagtggaggaggag
gtgcctgtattacaagaagaagttgtaatggaaagcattccagagaatggagtgcaaaga
tttggtgacattatcattgaacagcataatgaagaagattcttctatgttacatttggaa
ttggaagattctagtgatactactattcacgaaattaatatgaatcagagtgtacaaata
gaagttcaagaaaatgtacctgatttagaaacatctgcatctcaaattgatcattctaat
acagtatcggattgtatgatcatagaagaaagtagtatggataaagttgatatgttgaat
gaacgcgaacaaatggatatggaagggcaagatattagtaatgatgaaacaaatcaacgt
gtattaatagatttccaagaagttatgaatgatgatggagaaacaataacacaagtaaca
gaaatcttagaaacagaggaaattgaatctgaaactgttataaatgaaggtactggaatt
gaagttatggaggtagatagtcaacaagaaacatcagaaagtatagaaaatattacggaa
aaaactgtgcctgattatgatatgacaggaatggtggaaatggcagaaacaacagagggt
gatatggaatgtttacctgagaatgctattaaaaaaacagaacccgatacagaagctgta
tctgaagatgaactgcctactgaagcaacagcaaaggaacctgaaacagaagcagtatct
gatgaagaattgccagcagcagctcctgcagatttaggagaaactgaatcagtttctgaa
gatgaattgccattagacagtgaaaagaagaagaaaagtggaacaaaggtaatgagtaaa
accctggaaaagaagaataaaatagaaggaacaaataaacgtaagttaaatgcagaagga
gagtatgatcctagttcaccaacgtctgaaaataatgatgaaactccagcaaaaaaagtt
gcactttcaacggaagcagatccaggggacaataaacaagaaactaaaccagcatcacca
aagaaaaagaccttaccggaattagaaaaatactggaaagccgttaatgaagatccatca
gatttcacgggatggacatatcttcttcagtacgtcgatcaagagaatgatgctgaagct
gcacgcgaggcttatacgaaatttttggagcgttatccatattgctacggttactggaga
aagtttgcagattacgagaagaagaaaggcaaccccgaaaatgtccaaagggtattcgac
caaggtttgaaagccatttcgctcagtgtcgacctttggcttcattacatcaatcactgc
aaaaccgtctatgaaaaagatgaagaaaaactacgagaacaatacgaaagagctattgag
gcatgtggtcttgaattcagatctgatcgtctttgggaaagctatataaagtgggaattg
gagggcaaacgtctaagcagagtaacagcattatatgatcgcctattatgtactccaaca
cttggttatatttctcatttcgatgcatttcaagagtttgtctcttcaaacttacccaat
cgtattttaaatgttgacgattttcttgcattgcgtgctgaagtaaaagcacttttgaag
tcggatgacagtacttctacttcagcagcagatgatgcaccacctggagaagaaccgccg
ccacatgaacttccaccaactgatgaggagacccgtgctattagagaaaaaatcattagt
agtagacgtaaaatgcacaaagctaatattaatgcagttgctgcaagatggtcatatgaa
gaaggtattaagaggccgtatttccacgttaaacctttagaacgatgtcaattaaaaaat
tggaaagaatatttagactttgaaattgaacaaaaagatcagaatcggataatcatctta
tttgaaagatgtttaatagcgtgtgctttatatgatgaattctggatgagattcgttcgt
tatctggaatccttgaaaggtgataatgtggaaaaaattagagatgtatatacgagagct
tgtatggtgcatcacccgaagaaaccaaatttacatctacaatgggcaacatttgaagag
ggtcagggcaattttgagaaggcagcaaatatattggaaaatattgataatgtaatacca
aacatgttacaagtggcatatcgaagaataaatttggagcgtagaagaggagatttagat
aaagcttgtacattgtatgaaaattatattagcaatagtaagaatagaaccattgcgaat
aatattgtagtaaaatatgcacgatttttgtgtaaagtaaagagtgatgtggataaagca
atcaaagtattattgaaggcaacggaaaaagataaagataatccaaggctttatttacaa
ttgattgatttgggaatgcaaagaactcctgttgatactcaagaaattgtaggatatatg
gatatgtttatagaacgagaacacgcggatcttgaacaaagagtactttttgcacaacgt
aaagtagaatttctcgaagattttagtccggatattcgacaagtgttaaaagcgcatgag
caatttcaaaaatgtattaagcaagcaaaggaacggaaaaagacgaagaatgacgacaca
aaaacagatacttctcctccaaagaaagttaaaactggagatcaatctaatgtaccacct
ccgccttctgtaagttcgcagtcatcataccaatacagcagcggcccaagtggaccatat
cagtcacaacaacaatttcaaagtggtcaatatggtggtcaaggcggatatcaacagggt
tatcaacagtacccacctccttccgatcccaactatgccaattatcagaattggcaatat
ggacaaggagggccacaagcatatggaccatacaatcaatggggatcttacaattactat
tag
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integrated database retrieval system
