KEGG   Bombus pyrosoma: 122568330
Entry
122568330         CDS       T07776                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03420  Nucleotide excision repair
bpyo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    122568330
   03460 Fanconi anemia pathway
    122568330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpyo03032]
    122568330
   03400 DNA repair and recombination proteins [BR:bpyo03400]
    122568330
DNA replication proteins [BR:bpyo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122568330
DNA repair and recombination proteins [BR:bpyo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122568330
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 122568330
NCBI-ProteinID: XP_043583896
LinkDB
Position
LG6:complement(15193203..15197580)
AA seq 865 aa
MLEYENQIFLEILHEDGLVITAKGLGLETVFANILRAYIDPGNLVIVLGTTNHDEQYFID
FLKSQGLNQLPRIVSSEYTSDEREGLYLEGGVLFMSGRILIVDFIKKRVPLNLITGILVY
RAHNILNSYQEAFALRLYRQHNKTGFIKAFTNSALAFTVGFMQVERVMKALFVKKLFLWP
RFHTLVNNSLEKNKPDVIELHIKITPKMLNIQTSLLDIMNYIIKELKRLNKYLDLDDLTV
ENAIAKKFHKQLQSQLDPMWHQLSSTSKQLLSDLKMLRDLLACSTYEDCVSFYAMLNRLR
TMEYAVKNSGWLMLDSVDALFKNAKDRIYNEKNEIKPEATPKWTALTEVLLEIENDNKKN
KDNQNAEKVLILVHDRNICYQLRNYLTMGANKYLLYEAIKKLSHKEIAKTTEKNVEEKST
SAEDNEHNTEEEQDAYVLTLSQKVREENQSDSAAEDNKQQTLFEDCSQIVDLDLTNINTN
TPIVLIQSLKKYGDPMALQRALTEHTPTNIIMYVADISAVRQIEVYQNNNPSIDLKVYFL
IYESSVEEQEYLTSLRREKEAFHLLINAKTTMVIPEDQDGKSEDCLNLAIQSNADDELST
RKGGLSKISEIPNTVIVDMREFRSELPAILYTRGMKVEPITLQVGDYILSPDICVERKSI
SDLIGSLNSGRLYNQAIAMTRHYSKPMLLIEFDPNKPFCFQGYYYASKDVQNMYITSKLQ
LLTLHFPRLKLVWSPGPHATAQLFEELKQGKDQPNAEKVAQVGIEENKEVLAEKYNPRIQ
DFVSKLPGVTSKNLHLILGKGQSLDHLNKLTKEELTEMIENKTEAEMLYSAFHEKLSSAE
EKSSTNSKKLASKGRGKKLFTKIKQ
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgttggagtacgaaaatcaaatatttttggaaatactccatgaagatggtttggttatt
actgcaaagggacttggcttagaaactgtatttgcaaatatattaagagcttacatagat
cctggaaacttagttatagttttagggactacaaatcacgatgaacagtattttattgat
tttttaaaaagtcagggactcaatcaattaccccgtatcgtatcttccgaatatacttct
gatgaaagagaaggactgtatttggaaggtggtgtgctatttatgtcaggtcgaattctt
atagtagatttcataaaaaaaagagttccgttaaatttaattactggaattcttgtatac
agagcacataatatattaaattcatatcaagaagcattcgctcttcgtttatataggcaa
cacaataaaactggttttattaaagctttcactaattcagcattggcatttactgttgga
tttatgcaagtagaacgagtaatgaaagcattatttgttaaaaaattgtttttatggccg
cgttttcatacacttgtaaataatagtttagaaaaaaataagccagatgttatcgaatta
cacataaaaattacaccgaaaatgttaaacattcaaacttctttacttgatataatgaac
tatataataaaagaactaaaaaggcttaataaatatttggatttagatgatttaactgtt
gaaaatgcaatagctaaaaagtttcataagcaattacaatcacaattagatcctatgtgg
catcaacttagttctacttctaaacaattattatctgatttaaaaatgttacgtgatctt
ctcgcatgttcaacatatgaagattgtgtatcgttttatgcaatgttaaatcgcttacgt
acaatggaatatgctgtaaaaaatagtggctggttaatgttagattctgtagatgcttta
tttaaaaatgcgaaagacagaatttataacgaaaaaaatgaaataaaacctgaagctact
ccaaaatggacagcattaacggaagtattacttgaaattgagaatgataataaaaagaac
aaagataaccaaaatgctgaaaaagtccttattttggtacatgatcgaaatatttgttat
cagttaagaaattatttaactatgggtgccaataaatatttactgtatgaagcaataaag
aaactttctcataaagaaatagcaaaaacaactgaaaagaatgtagaagaaaaatctaca
tctgcagaagataatgaacataatacagaggaagaacaagatgcttatgtattaacatta
tctcaaaaagtcagagaagaaaatcaatctgattcagcagctgaagataacaaacaacag
actttatttgaagattgctcgcaaattgttgatctggatttaactaacataaatacaaat
acacctattgttttgatacagtctttgaaaaaatacggtgatccaatggcattgcaacgt
gctttaacagaacatacaccaactaatatcattatgtatgtagcggatatatctgctgta
cgacaaattgaagtttatcaaaataataatccatcaatagatttaaaagtatatttctta
atctatgagagctcagtggaagaacaagaataccttacatctttaagacgagagaaagaa
gcatttcatctattgattaatgctaaaactacaatggttattcctgaagaccaagacgga
aaatctgaagattgtttaaatcttgcaatacaatcgaatgcagatgatgaattgagtaca
cgtaaaggtggtttatcgaaaatatctgaaattcctaatactgtcatagttgacatgaga
gaattcagaagcgaactacccgctatactttatacacgaggcatgaaagttgaacctata
acattacaggtgggagattacattttatcaccagatatttgcgttgaaaggaagagtatt
tctgatttaattggttctttaaatagtgggagattgtataatcaagctattgctatgaca
agacattacagcaaaccaatgcttctaatagaatttgatccaaataaaccattctgtttt
caaggatattattatgctagcaaggatgttcaaaatatgtacattacttcgaaacttcaa
cttttaactttacattttcctcgtttgaaacttgtatggtcacctggacctcatgcaaca
gcacaattatttgaagaattgaagcaaggaaaagatcaaccaaatgcagaaaaagttgca
caagttggaattgaagaaaacaaagaagtattagcagagaaatataatcctcgtattcaa
gattttgtttcaaaattacctggagttacttccaaaaatttacatttaatattaggtaaa
ggacaatcactagatcatcttaataaacttacaaaggaagaacttactgaaatgattgaa
aataagaccgaagcagaaatgttatatagtgcatttcatgaaaaactttcttcagctgaa
gaaaaatcaagcacaaatagtaaaaaacttgcatccaaaggtcgtggaaaaaaactgttt
actaaaatcaaacagtaa

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