Bombus pyrosoma: 122568349
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Entry
122568349 CDS
T07776
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122568349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpyo03009
]
122568349
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122568349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
UTP15_C
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PAC11
Beta-prop_SPT8
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_ACSF4
WD40_like
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_SCAP
DSE1_N
TRM82_WD
Beta-prop_EIPR1
Beta-prop_VPS8
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
122568349
NCBI-ProteinID:
XP_043583922
LinkDB
All DBs
Position
LG6:394361..396549
Genome browser
AA seq
521 aa
AA seq
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MASFKKINTKIFARPNSEFTPDNIYWKKYSAPVLVKEFGPIDYIDFSPVEPHYFAVTCSV
RVQVYNPITKLVTKNLSRFKEATYGGSFRNDGKLICAGGEEAVIRLFDVNTKSLLRLFSG
HKAAIHRTFFTADNLHIASFSDDKTVAVWDIPSEKQMISFNEHSDYIRAGAVSPISTDIL
LSGGYDKHIYMYDTRTSKQILSVNHEAPVESLLFLPSGGIFLSAGGTEIRVWDALAGGRL
LAKITQHHKTVMCLKIASNGRRILSGSLDRHVKIYDSGTYKTVHSLDYPNSVLSIGISPN
DETIVAGMIDGLISVRRREEEVKSEKLQCKKVSYRRSGRNLHTPQVDVVVHEETKEIISK
HDTCLRKFEYSKALDCVMSRYVVKNVPHVAVALMQELIRRQGLKQALSGRDGKSLVNILK
FLNRHIGNIRFGRVLLYVANVLMDVYEDHLDELAAEPRKMFSILAAKLEEEENLILALSE
LQGKLHMILSAAENILPAPAKDVQALEPSSAAQKNLILSIA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttcaagaaaataaatactaaaatattcgcaagaccaaactccgaatttact
ccggataatatatattggaaaaagtatagtgctcctgttttagttaaagaatttgggcca
attgattatatcgatttttctccagtggaaccacattattttgctgtcacttgttcagtc
agagtgcaggtatacaatccaattacaaaattggttacaaaaaatctcagtagattcaaa
gaagccacctatggtggatcctttcgtaatgatggcaagctaatctgtgctggtggtgaa
gaagcagtaattaggctctttgatgttaatacaaaaagtcttcttcgacttttttctggg
cacaaagctgctatacatagaactttcttcactgcagataatcttcatattgcttcattt
tctgatgataagactgtagctgtttgggatataccaagtgaaaagcaaatgatatccttt
aatgaacattcagattatatcagagctggtgccgttagtcctatttctacagacatatta
ttgtctggtggttatgacaaacatatatatatgtatgatacaagaacaagcaaacaaatt
cttagtgtaaaccatgaagcccctgttgaaagtttattattcttaccctctggtggaata
tttttatctgcaggtgggacagaaattcgagtttgggatgcacttgctggtggcagatta
cttgccaaaattacccaacatcataaaactgtaatgtgtttaaaaatagcttcaaatgga
cgcaggattttgtctggctcattggatcgacatgtaaaaatttatgactctggaacatat
aaaactgttcattccttggattatccaaattcagttcttagtataggaattagtccaaat
gatgaaacaatagtagctggtatgattgatggtttaatttctgtgagaagaagagaagaa
gaagtaaaaagtgaaaaactgcaatgtaaaaaggtttcatacagacgctctggaagaaat
ttacatacacctcaagtagatgttgttgtgcatgaagaaacgaaagaaattatatccaaa
catgatacctgtttaagaaagttcgaatattcaaaagctttagattgtgtcatgtccaga
tatgtggtaaaaaatgtaccacatgttgcggttgcacttatgcaggaacttattagaagg
cagggcttaaaacaagctcttagcggtagagatggcaaatctcttgtaaatattcttaaa
tttctgaatagacatataggaaacattcgatttggaagagttttattatatgtagctaat
gtattaatggatgtttatgaagatcatttggacgaacttgctgcagaaccgcgaaaaatg
tttagtattttagcggcgaagttagaagaagaagagaatttaatactagcattatcagaa
ttacaaggaaaattgcatatgatattgtctgctgcggaaaatatacttcctgcaccagcg
aaagatgtccaggccttggaaccttcaagtgcagctcaaaaaaatttaattttaagtata
gcatga
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