KEGG   Bombus pyrosoma: 122568580
Entry
122568580         CDS       T07776                                 
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03013  Nucleocytoplasmic transport
bpyo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122568580
  09122 Translation
   03013 Nucleocytoplasmic transport
    122568580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpyo03019]
    122568580
   03041 Spliceosome [BR:bpyo03041]
    122568580
Messenger RNA biogenesis [BR:bpyo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122568580
Spliceosome [BR:bpyo03041]
 Complex C
  Other components
   EJC/TREX
    122568580
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122568580
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd eIF2A Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 RMC1_N Tricorn_2nd Beta-prop_EML Beta-prop_NOL10_N NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th DSE1_N Beta-prop_TEP1_C PAC11 Beta-prop_ELP1_1st B-prop_COPA_B_2nd CFAP251_N TRM82_WD Beta-prop_WDR75_1st Beta-prop_EIPR1 PD40 Beta-prop_Nup120_160 Beta-prop_DCAF12 PROPPIN Beta-prop_NUP159_NUP214 DPPIV_N
Other DBs
NCBI-GeneID: 122568580
NCBI-ProteinID: XP_043584408
LinkDB
AA seq 324 aa
MKITMSASRADELISYFKSHNKIREQQSHSAKVHSVGWSCDGKLLASGSFDKSVCIFSLC
PDRLKQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANISTRGENI
NISWSPDGNTIAVGNKEDLVTFIDARVMKVRAEEQFNFEVNEISWNKDSDTFYLTNGQGC
VHILSYPDLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRL
EWPVRTISFSYDGQLLATASEDLVIDIGEVETGEKIADIPVEAATFTVAWHPKQYLLAYA
CDDKDTYDRKRDAGSLKVFGFAND
NT seq 975 nt   +upstreamnt  +downstreamnt
atgaaaataacaatgtccgcttctcgtgcagacgagctgatcagttatttcaaatcacac
aacaaaattagagagcaacaaagtcattctgctaaagtacatagcgtaggatggagttgc
gatgggaaactgttagcttccggatcttttgataaatctgtttgcattttctccctttgt
ccggatcgtttaaaacaagaaacaacttttagaggacatggtggtagtgtggatcaattg
tgctggcatgccttttaccctgaattattatctaccgcgagtggagacaagacagttcgt
atatgggatacgaggactcaaaaatgcacagcaaacatcagtacaaggggtgaaaatatt
aatatatcatggtcacctgatggtaatacaatagcagtaggaaataaagaagatttagtg
acttttattgatgcacgggtgatgaaagttcgtgcggaagaacaatttaactttgaagtg
aatgaaatttcatggaataaggattctgatacattttatctaactaatggtcaaggctgt
gttcatatacttagctatccagatttagaactgttacatgtaatcaaagcacatccaggg
acatgtatttgtatagaatttgatcctactggaagatattttgcaactggttcagcagat
gcattagtttctttatgggatgcagatgaactgtgttgtttaagaacattttcaagatta
gaatggccagtgagaaccatatcattttcttatgatggacaattattggctacagcatct
gaggatcttgtgatagatataggtgaagttgaaactggagagaagattgcagatatacca
gtagaggcagcaacctttacagtagcatggcacccaaaacaatatttgttagcatatgca
tgtgatgacaaagatacttatgacagaaaacgtgatgctggcagtttgaaagtatttgga
tttgccaatgactaa

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