Bombus pyrosoma: 122569083
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Entry
122569083 CDS
T07776
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122569083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpyo03009
]
122569083
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
Pre-60S particles
RNases
122569083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF4288
Motif
Other DBs
NCBI-GeneID:
122569083
NCBI-ProteinID:
XP_043585503
LinkDB
All DBs
Position
LG7:15020246..15024388
Genome browser
AA seq
689 aa
AA seq
DB search
MKNLTTKQLQRIEKKKKKMAALLEITKLNDKDREAKMLALKKASIEADQSNANDTDSSEV
SMEDNITRKRPCNEDLKETLLEDSTKKENVEGIEESDTLANKKPRLSGDEYLKLKQELRE
RKKKLKTIPRFHLKVAGESASLTINVKSENRIPIFLSDIQHLLLYSLHGHHSPYVPARWC
HLEKYNRVTHTVVLVVEGLSLYHFMAYESMFPHITSKLEHRVEVVTPTAYGGSVIEDLAA
VPITGMQSDKLLKQYGSLEAALQSNSDVIKLLRTVFPMDRDPSTNVEKFKTEYSLPKTDK
FPRTLLLLSLCQMVEENYPVPLKGELAKKYGNYIMTKDVYVEANETSPMFGLDCEMCKTT
IGELELTRISLVDESMNVIYDSLVKPDNRITDYLTQFSGITKEMLEGVTTTLSDVQQTLR
KLLPADAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQILAREFLGERIQ
ESSSGHCSTQDSQASMKLVQLKLANSVDYGDAVLLGRCNMEILKMKPEKRTDNQRSLKIE
LRKYATSIFKHVTKDQKTAAIVGNGEVMNEYSKYLTSSINIMDDENFDKNDQVRLVVADS
NKQAVLRATQIAMEHAFTLCHVRIGQEKLKSDKIEKTFRTVNKWVHKLWQHMAVNGLACV
IFAGENNAANGACFLNLKREIPEDYTICT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctaacaacaaaacaattacaaagaatagaaaaaaagaaaaagaagatggct
gcacttctggaaataactaaattaaatgataaagatagagaagctaaaatgcttgctctt
aagaaagcttctatagaagcagatcagtcaaatgcaaatgatacagacagcagtgaagtc
tccatggaagataatatcacacgtaaacgtccatgtaatgaagatttaaaagaaactctt
ttggaagattctactaaaaaagaaaatgtagaaggtatagaagaatcagatacacttgct
aacaaaaagcctagattaagtggagacgagtatctaaaattgaaacaggaattaagagaa
cgtaaaaagaaacttaaaacaatacctcgatttcatttaaaagtagctggtgaaagtgct
agcttaactattaatgttaaaagtgaaaacaggattcctatttttcttagtgatatacaa
catttattgttgtattcattacatggtcatcactcaccctatgtgccagcaagatggtgt
caccttgaaaaatataatagggtcacacatactgtggttcttgttgttgaagggctttcc
ctgtatcattttatggcttatgaaagtatgtttccacatataacatcaaagttggaacat
agggtagaagttgtaacacctacagcatatggagggtctgtaatagaggatcttgcagct
gttcccataaccgggatgcaaagcgataagttacttaaacaatatggatcattagaggct
gcattacaaagtaatagcgatgtaataaaattattacgaactgttttcccaatggataga
gatccatcaacaaatgtggaaaagtttaaaacggaatatagcctcccaaagactgataaa
ttcccccgtacactattacttctatctttatgtcaaatggtagaagaaaattatcctgtc
ccattaaagggtgaactagcaaaaaaatacggaaattacataatgacaaaggatgtttat
gtagaagctaatgaaacatctccaatgtttggtctagactgtgaaatgtgtaaaacaact
attggagaattggaattaacaagaatatctctcgtggatgaaagtatgaatgttatttat
gatagtctggtaaaaccagataatcgtatcactgattatcttactcaattcagtggtata
acaaaagaaatgttggaaggtgtcacaactacattgtctgatgttcaacaaacgttacga
aagttacttcccgcagatgcaattctagtaggacaaagtttaaattctgatcttcataca
ttaaaaatgatgcatccatacattattgatacatctgttattttcaatattaccggtgac
agatatcgaaagacaaagttacaaattttagcaagggaatttcttggtgaaagaatacaa
gaaagtagttctggtcattgttcaactcaagattcacaggcttctatgaaattagtgcaa
ttaaaattagcaaatagtgtggattatggagatgctgtgttacttggtcgttgcaacatg
gaaatattgaaaatgaaaccagagaaaaggacagataatcaacgatcattaaaaattgaa
ctacggaagtatgctacatcaattttcaaacatgtaacgaaggatcaaaaaactgctgcc
attgtgggtaacggagaagttatgaacgaatattctaaatatttaacttcttctatcaac
attatggatgatgaaaatttcgataaaaatgatcaagtacgtcttgtagtggcagacagt
aataaacaagccgtcctgcgagctacacaaatagccatggaacatgcctttactttatgt
catgttaggataggacaagaaaaattaaaaagtgataaaatagaaaagacgttccgtact
gtaaataaatgggtacataaattatggcagcatatggcagtgaatggtttagcatgtgtt
atatttgcgggagaaaataatgcagcaaatggtgcttgttttttgaatttgaagagagaa
atacctgaagattatacaatatgcacttaa
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