Bombus pyrosoma: 122570124
Help
Entry
122570124 CDS
T07776
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122570124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122570124
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122570124
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122570124
RNA polymerase I system
122570124
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
122570124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW7_SPT5
KOW2_Spt5
KOW
KOW6_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
SH3_KIN17_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
122570124
NCBI-ProteinID:
XP_043587976
LinkDB
All DBs
Position
LG8:complement(7837351..7843164)
Genome browser
AA seq
1133 aa
AA seq
DB search
MSDSEASNLSDNESDRGVGGSESDQEDNHSVKSAAGSDGGNAGERSRSASRSRSPSRSRS
RSPHRWRSRSRSASGSEDGRGDEAEEARSGDEEMVEPEEEPEGEDLEGSSEYDEEEEEED
DDRPRRKRRKDKYRDFIIDEAEVDDEVEDDDEWEEGAQEIGIVGNEVDELGPTAREIEGR
RRGTNLWDSQKEDEIEEYLRKKYADESIATRHFGDGGEEMSDEITQQTLLPGVKDPNLWM
VKCRIGEEKATVLLLMRKFITYQYSNEPLQIKSIVAPEGVKGYIYIEAYKQPHVKAAIEN
VGNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQN
QVHLKLLPRIDYTRPRGALRTAQSESEALKRKRKRRPTAKPFDPEAIRAIGGEVTSDGDF
LIFEGNRYSRKGFLYKNFTTSAIIAEGVKPTLSELERFEEAPEGVELDLSGTPGTGAGNK
EDATVTHSFSTGDNVEVCEGELINLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKY
FTMGDHVKVVAGRYEGDTGLIVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSL
GQFQWGDLVQLDAQTVGVIVRLERENFHVLSMHGKVIEARPQGLTKRRENRNAVALDSQQ
NTIQRKDIVKVVDGPHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKS
NISSISPVAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGP
YKGNVGIVKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQT
PMYARDGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTN
DFDGYSMEEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPT
GYVATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTSVGSGIIG
GTEWHTTDIEVRIRDSHQDPALAGQQGVIRGISGGMCAIFLPVEDRVVNLICEELEPVVP
SRGDRVKVIIGEDREAVGTLLSIDNQEGVVKLNKDEVKMLHLRFLCKMKASNT
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcagaggcgagcaatctatcagacaatgaaagcgatcgaggagttggtggc
agtgaaagtgatcaagaagataatcattcagtgaaatccgcagctggcagcgatggtgga
aacgctggtgaaagatcacgtagcgcctctcgcagtagaagtccgtccaggtcgcgatcg
aggagtccacacaggtggcgatcacggtctcgatcagccagcggttcggaggatggtaga
ggagatgaagcagaggaagcaagatctggtgatgaagagatggtggagcctgaggaagaa
cctgaaggggaagatttggaaggaagtagcgaatatgatgaggaagaagaagaggaggat
gatgatagacctcgtaggaaaaggaggaaagacaaatatcgtgattttatcatagacgaa
gctgaagtagatgatgaagttgaagatgatgacgaatgggaagaaggtgcgcaagaaatt
ggtatcgttggaaatgaagtggacgagttgggtcctactgccagagaaattgaaggcagg
cgtagaggaactaatctttgggattctcaaaaggaagatgaaatagaagaatatcttaga
aagaagtatgcagatgaatctatcgctactcggcattttggtgatggcggtgaagaaatg
agtgacgaaatcacacaacaaactttactaccaggtgtgaaagatccaaatctgtggatg
gtaaaatgccgtattggagaagaaaaagcaacagtactattgttaatgcgaaaatttata
acataccaatattcaaatgaacctcttcaaataaaatctattgtcgcacctgaaggagta
aagggttatatttacatagaagcgtacaaacaaccacacgtaaaggcagccatcgaaaac
gtaggaaatctaagaatgggtatttggaaacaacagatggtaccgatcaaagagatgact
gatgtgttacgtgtagttaaagaacagacaggcttaaaagcgaaacaatgggttagactt
aaaagaggcatttataaagatgacatagctcaagttgactatgttgacttggcacaaaat
caggttcatttgaaattgttgcccagaattgattatactagaccacgtggagctttgaga
acagcacaaagcgaatctgaagccttaaaacgcaagagaaagagaagaccaacagccaaa
ccgtttgaccccgaagcaattcgtgctatcggaggagaagtcactagcgatggtgacttc
ttgattttcgaaggaaatagatatagtagaaaaggatttttgtataaaaattttaccaca
agtgcgattatcgcagagggtgtgaaaccaacattatctgaactagaaaggttcgaggag
gctcctgagggtgtcgaattagatttaagcggaactccaggaactggtgcgggtaataaa
gaagatgcgacggtgacccattctttcagtacaggggacaatgtcgaagtatgcgaggga
gaattgattaacttgcaaggaaaaattgtctctatagatggaaacatgattatggttatg
ccaaaacatgaggaacttagagaagccttagaatttcaagcatctgaattacgaaaatat
ttcactatgggcgaccacgttaaagttgttgcaggaagatatgagggtgataccggttta
atagttcgagtcgaacaaaatagagtagttttgttttctgatctttcaatgcatgaatta
gaagtgcttccgagagatctacaactttgttcggatatggcaactggagtagacagttta
ggtcaattccaatggggtgatttagtacagctagacgcacaaactgtaggtgtaattgtt
cgattggagcgtgaaaattttcacgtactctcaatgcatggcaaggttatagaagctaga
cctcagggactcacaaagagacgcgagaatagaaatgcggtggcgttagactcacaacag
aacactatacaaaggaaagacattgtcaaagtggtggatggtccacacgctggaaggggt
ggagaaataaaacatttgtacagaagcttcgcatttttgcattcgcgaatgttcgttgac
aacggtggaatcttcgtttgcaaaacgagacatttgcaactttctggtggaaataagtcc
aatatatcgtctatatcacctgtggcaggattcatgtctccaagaatagcttcgccaatg
catcctagtggaggtggcttcggaagaggtggcggaggtggaagaggtagaggtcgtggt
ggtggagctagacgtgacagagaattgataggaaccactatcaaaataactggcgggccg
tataagggaaatgttggaatagtaaaagacgctacagagacaactgctcgtgtagaatta
cactccacctgtcagaccatctccgtggacaggtctcacattgcgaacgttgctgtactc
acaaaggatggtggtttcagcagctacaacaggacaccagcatatggtggcggacagaca
cccatgtatgctagagatggatcgaaaacacccatgcatggctctcaaacaccaatgtac
gaaaatggttctcgtacacctcattatggctcgatgacgccatcccacgatggttcacgc
acaccgggacaatctggtgcctgggatccagctgttaccaatactcctgccagaacgaac
gattttgatggatacagtatggaagaaggcggatctccaggttatgcgccaggttatcct
tcaactggaccattcacgccacaaacacctggcacgatgtacggttcggagcagagcttc
agttcatatcaaccgagtcctagcccggcaggaagtgccactgcaagtccaagtcctaca
ggatacgttgcaactccctcgccaagtggtactggatatactactagtccgcatggagcc
tttgccacgccttcacccatgggttacagtcctatgactccaggagttgcaggtagtcca
tacaatccacagacaccaggcgccggtctagatacaagtgtcggttctggaatcattgga
ggaaccgaatggcacacaacagatattgaagttcgaattcgtgactctcatcaagatcct
gcgttagctggccagcaaggtgttattcggggaatatccggtggcatgtgtgcaatcttc
ctacctgtagaagacagagtagtgaatttgatttgcgaggagttagaaccggtagttcca
tcgcgaggtgaccgagtcaaagtgattatcggagaagacagagaagcagtaggcactctg
ctatccatagataaccaagaaggtgtagtgaaattgaacaaggacgaagtgaaaatgttg
cacttgcggtttttgtgcaagatgaaggcatcgaatacataa
DBGET
integrated database retrieval system
