Bombus pyrosoma: 122570275
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Entry
122570275 CDS
T07776
Name
(RefSeq) uncharacterized protein LOC122570275 isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122570275
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122570275
5.6.2.5 RNA 5'-3' helicase
122570275
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122570275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
Viral_helicase1
AAA_19
AAA_30
UvrD_C_2
Yop-YscD_cpl
PIF1
AAA_16
Motif
Other DBs
NCBI-GeneID:
122570275
NCBI-ProteinID:
XP_043588322
LinkDB
All DBs
Position
LG8:complement(4963006..4969558)
Genome browser
AA seq
1770 aa
AA seq
DB search
MSANNYYRFILERINTSDTIVLDQPGHTYTCGRAKENEIICLSLTVSRRHCMFFHSKNEL
YVTDLKSANGIFINGVAQKPFQTTKLYSNDVIGIGCPTAAAATGNNDLYAYKLHSIGPQL
LEDGHSVSTLSETTIVNNVNIVNDKSVTDRVDKRKREDTNSNLEVASKIPKLQDENYILE
KNYLQEKDKEKNENDIEIVHVSLNNNSSNGKNKNCDKLNANKHMDANMPTSSNWTNNTRT
ESLMDDELINCQDLRSNMIIGTTKKDIKKGEISLNKSTEKVNANMLQEIDTYTGNNLMYT
KDVQNTVNNLFYTKDVQNTVNNLHNFESKNTIKDSRIRVKSDLEFRNCNSKYSRRNSSET
NTVNEIEKPNTVDKINQFKNNEEENLLAALPSNFMCNEDGIIKFENELQLTDTDENAILN
SSDTSFVPVGSPIKLKKVQQQPKTKFSEDDVINLSDSEDDIFPCSQLFDIGYGMNTTMKD
EVKEEQPTEVESERFGLDDVDFVISITDSEDEEDKNWFYRLSRSQTFSENDEIDLKSKNG
IKKEDIDINVNTKESIVSEFELIGTNEKLPNELVPRATIDEEKEAENSSLQDIDNLNKVF
SPENTLLKQSTSAASDTKKHSKSPKNQSLPPVQKEAKNYIHPLSNTKMETITPTKSKKSV
EKKVPQIEPPHLPTSRRRRSVSNKDKQIPEKSDKSVRSGKSGKSEKSEKPSKPRLSAKEK
KEQQEKLKLEQYMHAKEQKNRKVLHKWADCLPPSTKKLNTLSKEEKKALADNRKMKLKKI
AEENRVSLEGNQEKKRIVSKPKAKVTTKSRNDFLVEETIAASREETATEESKTSSSRSTT
ANRTSSNAKTIDSTKRKNVSKEIAMDVQHKLTLNDISNLGKIPKKSNNTKITINTVEAET
ALKDLSLEKRTEKTIKLKDTAVSGKPSLESCKTLEKGPSVPLKSNLKSPVVKPYSKKRVS
FSTEIQTVREYEIDESNVLKKLTGKDAPLRREKVNTMNQFLCRILSWKPVWLEEQLYLNQ
DPPVIQPEELNPTLTHYRSYDEYYNIVSSLLLLEIWHNITNKFQSIEDIHRRPTFMCSIV
ENSIQTNVEPNNILLTTLMVEVLATKDDVQRQIHPKYGDLVYFEYVQNHENSQKSKDFRK
VFAYVTNVYTTVLTPLTHFNRDLQNYVKDAHILLTYTVITKYLDKNILVNRVQRLRAAFY
LRPNLRMVQALQFLPKSPLVNLILCPRIEMYKLPTVSDLETLITGDKLNEKQMEAVSKIT
KAVIQKDTKLCFIQGPPGTGKSKVIVNIVTQILYGNNRYTSNGSSFRMLVCAPSNAAIDD
IVLRLLEIRTMIKKQAKIKPFRMVRIGQSQMMHSKVKDISITELAKREIKKTCKSSTVPS
DSIESEKLFLQSKINALQCKLNSNNLDNTHKDHVRMKLADMSAKYELLKNRTSWNEANDR
SRESIRLQRTAENRILEFADIITCTLSSCYTSQMEYIFGVNKKKISVCIVDEATQSCEAE
TLIPLMLGIDTLVLVGDHNQLPATVLSTRAKKYGLDQSIFSRVQSAFDLQPNNPIIMLDT
QYRMQPDISSWPNKFFYGCKLKNAVERDDKFPFHSYRILNLITNQNHDNSNNEEADFVAN
IIYCMLNFANLDNWQSCISCGILTPYNNQRAMILTKVNAKISSLPENVKRKIKYIVDTVD
RFQGQECDVIILSCVRSQKIGFLSDRQRLCVALTRAKHSLIICGNFNIFMRYPMWNSLIA
DAKTRKVFFNVNPNANSHEIKSYVIKRVMK
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaataactactaccgctttatattggaacgtattaatacttcggacacaatt
gtattagatcagccaggacatacatatacttgtggtagagccaaggaaaatgaaataata
tgccttagtttgacagtatctaggcgccattgtatgtttttccatagcaaaaatgaatta
tatgttacagatttaaagagcgcgaatggtatatttataaatggcgtagctcaaaagccc
tttcagacaactaaattatactcgaatgatgttattggcattggatgtcccactgctgca
gctgcaactggaaacaatgacttatatgcttataaactacattcaattggaccacaactt
ctggaagatggtcatagtgttagtacactttcagaaactactatagtaaataatgtaaat
atagttaatgataagtcagtgactgacagagtagataaacgtaaaagagaagacacgaat
tccaacttggaagtggcaagtaaaattcccaagttgcaagatgaaaattatatcttagaa
aaaaattatctgcaagaaaaggataaagagaaaaatgaaaatgatattgaaatagttcat
gtttcattgaataacaattcatcaaatggaaaaaataaaaattgtgataaattaaatgca
aataaacatatggatgccaacatgcctacatcaagtaattggacaaacaatacaagaaca
gaatcattaatggatgatgaattaataaattgtcaggatctgagatcaaatatgataata
ggcaccacaaaaaaagatattaaaaaaggggaaatttctctcaataagagtacagagaaa
gtaaatgcaaatatgttacaagagattgatacttatactggaaataatttaatgtatact
aaagatgtacagaatacagtaaataatttattctatactaaagatgtacagaatacagta
aataatttacataattttgaatctaaaaatacaatcaaggacagtagaataagagtaaaa
tctgatttagaattcaggaattgcaactcaaaatacagtagaagaaatagtagtgaaaca
aatactgtgaatgagatagaaaaaccaaatacagtcgataaaatcaatcaatttaaaaac
aatgaagaagaaaatttactcgcagcacttccttcaaatttcatgtgtaacgaggatggt
atcataaaatttgaaaatgaattgcaattaaccgatactgatgaaaatgctattttaaat
tcctcggatacaagtttcgttccagtcggatctccaataaaactaaagaaagtgcaacaa
caaccaaaaacaaaattttcagaggacgatgttataaacttaagcgatagtgaggatgat
atttttccgtgctctcaattgtttgatattggctatggtatgaacacaaccatgaaagat
gaggtaaaagaggagcaacctacagaagtagaaagtgagagattcggattagatgatgtg
gattttgttatttcaataacagatagtgaagacgaagaagataagaattggttttacaga
ttatcccgaagtcaaacattcagcgaaaacgatgaaattgatctgaaaagtaagaatggt
ataaaaaaagaagatatagatataaatgtcaatactaaggaatcaattgtaagcgagttt
gaattaatcggaactaatgaaaagctaccaaatgagttagttcctagagcaaccatagac
gaagaaaaagaagcagagaactcatcgttgcaggatatagacaatttaaataaagtattt
tcaccagaaaatactttacttaaacaatccacgagcgctgctagcgatactaaaaaacat
tctaagtctccgaaaaatcagagtttgcctccagtgcaaaaggaggcaaaaaattatatt
catcccttgagtaacactaaaatggaaactattacacccaccaaaagtaaaaagtcggtt
gagaaaaaggtgcctcaaatcgaacctccacacttacctacctccagaagacgaagaagt
gtttctaataaagataaacaaatcccagaaaagtctgataaatctgtgagatctggaaaa
tctggaaaatctgaaaaatctgaaaaaccttcgaaaccgcgattaagtgctaaagaaaag
aaagaacaacaagaaaagttgaaattagagcaatatatgcacgcaaaggagcaaaagaat
cgtaaagtacttcacaaatgggcggattgtcttccccctagtacaaagaaattaaatact
ctttctaaggaagagaagaaagcattggcagataatagaaagatgaaattgaagaaaatt
gctgaagaaaaccgagtatctttagaaggtaatcaagaaaagaaacgtattgtttctaaa
ccaaaagcgaaagtaacgacaaagtcccgaaacgatttccttgtcgaggagacgatcgct
gcatctagagaggaaactgcaacagaggagtctaaaacttcgtctagtcggtccacaaca
gcaaatagaacttcttcaaatgcaaaaacgattgattcaacaaaacgtaaaaatgtctct
aaagaaatagcaatggatgtacagcataaattaactcttaatgatatttcgaatttggga
aaaattcctaaaaaatcaaataatactaagataacaataaataccgtagaagcagaaaca
gcattaaaagatctttcattggaaaaaagaacagagaaaacaattaaattgaaagatact
gcagtaagtggtaaaccaagcttagaatcttgtaagacattggaaaagggaccttctgta
cctcttaagtcaaatcttaagtcaccagttgtaaaaccgtattcgaagaaacgagtgtct
ttttctacagagattcaaactgttcgtgaatatgaaattgatgaatcgaatgttttaaaa
aaattgacaggaaaagatgctcctctacgtcgcgaaaaggtcaatacaatgaaccaattt
ttatgccgcatcttatcctggaaaccagtgtggttggaagaacagctatatttgaatcaa
gatccacctgttattcagcctgaagaacttaatcctaccttaactcattatagatcgtat
gatgaatattataatattgtaagttcgcttttgttgctggaaatttggcataacatcaca
aacaaatttcagagcatagaggatatacacagacgccccacattcatgtgctctatagtt
gaaaactctattcagacgaatgtggagccaaataatatacttcttacaacgttgatggtg
gaagtattagccacaaaggacgatgtgcaaaggcaaattcatcctaagtatggggacctt
gtatattttgagtatgttcaaaatcacgaaaactcacaaaaatcaaaagattttcgtaaa
gtgttcgcatatgttactaatgtatacacaacagtattaacccctctgacacattttaac
agagacttacaaaattacgtaaaagatgctcatatattgttaacatatactgtgataaca
aaatacctcgataaaaatattctagtgaatcgagttcaacgattaagagctgcgttttat
ttacgtcctaatttacgaatggtacaagcattgcaatttctccctaagtcgccattagta
aacttaatcttatgtccaagaatcgaaatgtacaagttgccaactgtttctgatttagag
acattgatcacaggagataaattaaatgagaaacagatggaagctgtaagtaaaataacc
aaagcagtaatccaaaaagataccaaattgtgttttattcaaggaccacctggaactgga
aaatcgaaagttattgtaaatatagttacccaaattttgtatggaaataacagatataca
agcaatggaagttcttttaggatgttagtttgtgctccatcaaatgcagctattgatgac
attgtcttaagattattagaaattaggaccatgataaaaaagcaggcaaagataaaacca
tttaggatggttcgtattgggcaatcacaaatgatgcattcaaaagtgaaagatatttct
attactgaattggcgaaacgagaaattaaaaaaacatgcaagtcgagcactgttccatcc
gatagtatagaaagtgaaaaattatttttacaatctaagattaatgcccttcaatgtaag
ctgaactcaaataatttggataatactcataaagaccatgttaggatgaaactggcagat
atgtctgcaaaatacgagttactaaagaatcgtacatcatggaacgaagcaaatgataga
agcagagaaagcattagattgcagcgtacggcagaaaacagaattcttgaatttgcagac
ataataacctgcaccctctcatcctgttatactagtcaaatggaatatatttttggtgtt
aataagaaaaagatatctgtgtgtattgtggatgaagctactcaaagttgcgaggcagaa
accttgataccattgatgttaggaatagatacattggttttagttggcgatcataatcaa
ttaccagctactgttctgagtacacgggcaaagaaatatgggttggatcaatcgatcttt
tctcgagtgcaaagcgcctttgatttacaaccaaataatcccataattatgctagacact
caatatcgaatgcaacctgatatttcctcttggccaaataagttcttctatggttgtaaa
ttaaagaatgcagtagaacgcgatgataaatttccattccattcatatcgaattttaaat
ttgattacaaatcagaatcatgataactcaaacaacgaagaagcagattttgtagctaat
attatttattgtatgctaaactttgccaatttggataattggcagtcatgcatttcgtgt
ggaattcttacaccatataataatcaaagagctatgatattgactaaagttaatgcaaaa
atatcttcattgccagagaatgttaagagaaaaataaaatatattgtggacactgtagat
cgttttcaaggtcaagaatgtgatgtgataattttgtcatgtgtgcggagtcagaagatc
ggttttctatcagatagacaaagactttgtgttgcacttacaagagcaaaacacagcctg
ataatatgtggtaactttaacattttcatgaggtatccaatgtggaattcattaatagca
gacgcgaaaacgcgtaaagtattttttaatgttaatcccaacgcaaattctcatgaaatc
aaatcttacgtaattaaacgtgtgatgaaataa
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integrated database retrieval system
