Bombus pyrosoma: 122570390
Help
Entry
122570390 CDS
T07776
Name
(RefSeq) zinc finger protein DPF3 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122570390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122570390
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122570390
Spliceosome [BR:
bpyo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122570390
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122570390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
SR-25
Lar_restr_allev
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
122570390
NCBI-ProteinID:
XP_043588567
LinkDB
All DBs
Position
LG8:598389..612822
Genome browser
AA seq
528 aa
AA seq
DB search
MTAITISPAAQGIIQVVNESNLCKIEGFLNDTAYREAIENSSNYNSRLCRERRLRMPFLD
SQTGSVAQNHSALFMSSRERLPGLLHGQIYTYPSKRWRKKRRQYLMHYLHPKRGPRGDTE
DGNEGVETVTHVNDDSKDSVALKDEHSKDAWYYDEQDMLDMDTYEEPDAESDYDYEESYS
SKRKRRKPRGGGHHPARSHPSSTDSPGGKRTKGGGRGRKKTNYDAVDTDKPFVCDLCSAR
YKTRPGLVYHYGHSHSTSSGDPAKELSPSPAEVEPRSVADTAASNQPGGTRRGRQNATSS
STSSPSPAAPSASAAGASAQPQPQSQPAQPQPQQSQQQQPQQPSQQQQPAQQQQQLPAVP
PTVAPASPTIPAVKEEHLPAVPSPGTAVPSPSSVRTEGPPTPGTNEKKAGKSAQPSPYCD
FCLGDARENKKTGGSEELVSCSDCGRSGHPTCLQFTANMIVSVRKYRWQCIECKCCSICG
TSDNDDQLLFCDDCDRGYHMYCLSPPLASPPEGSWSCRLCIAEFHRRD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacagccattacaatctcgccggctgcacaaggaattattcaagttgtaaatgaaagc
aatttgtgtaaaatcgaaggcttcctcaatgacacagcatatagggaagccattgaaaat
tcctcgaattataatagtcgactatgcagagaacgacgtttacgtatgcctttcctcgat
tctcaaacaggtagtgtagcacagaatcactctgcgctatttatgtcttcaagagaaaga
ttacctggtttgttacatggtcagatatatacatatcctagtaaacgatggaggaaaaaa
cggcgacaatatttgatgcattatttacatccaaaaagaggaccaagaggtgacactgaa
gatggtaatgaaggtgtagaaactgtgacacatgtaaatgacgatagcaaagattcagtg
gcccttaaagatgaacatagtaaagatgcgtggtactatgacgagcaagatatgttggat
atggacacgtatgaagaacctgatgctgaaagtgattatgattacgaggaaagttatagt
agtaaaaggaaacgaagaaaaccacgcggaggtggccatcatcctgcacgaagtcaccca
tcttctacagatagtcctgggggcaaacgtactaagggtgggggacgcgggcgcaaaaaa
accaactatgatgccgttgacactgataagccattcgtttgtgacctatgcagcgcacgg
tataaaaccagacctggtctggtctaccattacggtcattcccactctacttcctccggt
gatcctgctaaggaactaagtcccagtcctgccgaagttgaacctaggagcgttgcagac
accgctgcttcgaaccagccaggtggtacacgtcggggtcgtcagaatgcaacttcgtcg
agtacttcgagtccctctcccgcagcgccgtccgcgtccgctgcgggagcatcggcgcag
ccacaaccgcagtctcagccggcccagcctcagccgcaacagtcgcagcagcaacaaccg
cagcaaccgtctcagcaacagcagccagctcagcagcagcaacaattgcccgcggtaccg
ccaacggtagcgccagcatcgcctacgataccagccgtgaaggaggaacatctgccggcg
gtgccgtcgccaggtacagctgtcccctcgccttcctcggtgaggacggaaggcccaccg
accccagggacgaacgaaaaaaaagctggcaagtccgcgcaaccgtccccatactgcgac
ttctgtctgggcgatgctagggaaaataaaaagaccggcggctccgaagagttggtctct
tgcagtgattgcggtcgctcagggcatccgacttgtttgcaattcacagcgaacatgatc
gtttctgttcgcaagtacaggtggcagtgtatcgaatgcaaatgctgttccatttgtggt
acttctgacaacgatgatcagctgctgttctgtgacgactgtgatcgtggataccatatg
tattgtctgtctccacctcttgcgtctcctcccgagggctcctggtcttgccgtctgtgc
atagcagagtttcatcgccgtgattaa
DBGET
integrated database retrieval system
