Bombus pyrosoma: 122570678
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Entry
122570678 CDS
T07776
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bpyo04040
]
122570678
Ion channels [BR:
bpyo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122570678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
122570678
NCBI-ProteinID:
XP_043589237
LinkDB
All DBs
Position
LG9:complement(6463136..6532114)
Genome browser
AA seq
2062 aa
AA seq
DB search
MSEDSDSVSEEERSLFRPFTRESLAAIEARIAEEHAKQKELEKKRAEGEGGFGRKKKKKE
VRYDDEDEDEGPQPDQMLEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQRTFVVISKG
KDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPEDGSWGNLTDENWERFVSNETNWYVDEAKNMPLCGNSSGAGQCLPGYTCLQGYGE
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAALAKENKLAAQAAAREAAAVAAVAAA
DQIVKSPSDFSCHSYELFVGQEKGNDDNNKERMSIRSIESVSEHRVKQINNHTATTKPRK
VSAVSRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRFVGPPGGD
RKPLVLSTFLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSY
TSHGDLIGGIANAGKPMTKESQLRIRSVRPPSVNGHFTDSNQKYHYEGDLEDPMGKAKQQ
DNPFIEPSQQHAVVDMKDVMVLNDIIEQAAGRQSRTPEQGVSTYYFPTDDDEEGPKFKDK
LLAAVLRCIDIFCVWDCCWLWLEFQKYVSLVVFDPFVELFITLCIVVNTLFMALDHHDMD
KDMEKVLKTGNYFFTATFGIEATLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQ
GLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFG
KNYTDNVDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLAT
VVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKRNVLYLAK
MMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAYRDKKSAKEINQLEVAI
GDGMEFTIHGDLKNKLKKGKLCMNNSKVIANSINHRDYRLDNDYINQNEDDTISNKSYGS
HKNRAFKDESHKGSMDSLDGEEKKDASKEDLEQEEDLGEEGEEGEGVLGDAIIQADEDPI
ESDYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFQLIENKYFETAVILMILLSS
MALALEDVHLQQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKKYFTNAWCWLDFIIV
MVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL
VCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSHEIIPDRNACLAENYTWENSPMNFDHV
GKAYLCLFQVATFKGWIQIMNDAIDSRELNKQPIRETNIYMYFYFVFFIIFGSFFTLNLF
IGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEI
VTDKKFDMIIMLFIGLNMLTMTLDHYQQTQTFSDVLDYLNMIFIVIFTSECLMKIFALRY
HYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIR
TLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMILL
FQMSTSAGWDGVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVINMY
IAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSDFLDVLEPPLQI
HKPNKYKIVSMDIPICKGDMMFCVDILDALTKDFFARKGNPIEESAEIEVQTRPGEAGYE
PVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDADTDPRVRQTAVLVESDGFVT
KNGHRVVIHSRSPSVTSRTADV
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctgtatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgaggctcgcatcgccgaggaacatgccaagcagaaggag
ctcgagaagaagagagcggaaggcgagggaggttttggacggaagaaaaagaaaaaagaa
gttcggtatgacgacgaggacgaggacgagggtcctcagccggatcagatgctcgagcaa
ggagcaccgattccggtccgactgcacaacgaatttccacccgagttggcctccacacct
ctcgaggatatcgatagcttctatcataaccaaaggaccttcgtcgtcatcagcaaggga
aaggacatattcaggttctcagcgacagatgcgatgtggatcctcgacccgttcaaccca
atacgacgtgtggccatttacatattggttcacccactgttctccctcttcattatcact
acaatattggttaactgcatactcatgatcatgcccactacgcccaccatcgagtctacg
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggaca
tttcgagtcctccgagccttgaagactgtcgctattgtaccaggtctgaaaaccattgtc
ggcgctgtgatagaatccgtgaagaacctgcgcgatgtgataatcctgacgatgttctct
ctttccgtctttgcgctgatgggcctccagatttacatgggggtgctcacgcaaaagtgt
ataaagaactttcccgaggacggctcctggggcaatctcaccgatgaaaactgggagcga
ttcgttagcaatgaaactaattggtacgtggacgaggcgaaaaacatgcctttgtgtgga
aattcatctggagcagggcagtgccttcctggctacacgtgtttacaaggatacggtgaa
aatccgaattacggttacacgagtttcgacacctttggctgggctctactctccgctttt
cgtttgatgacgcaagattattgggaaaatctgtatcaattggtgcttagatcggccggt
ccatggcatatgttgttctttatcgtgatcattttcctcggctccttttatctggttaac
ttaatcctcgctattgtcgcgatgtcttatgatgagttgcaaaagaaagctgaagaagaa
gaagctgccgaggaagaagccataagagaagccgaggaagcagctctagcgaaagagaat
aagctggcggcgcaggcggcggctcgggaggcggcagccgttgcggcggtggccgccgcc
gatcagatcgtcaaatcaccgtcagacttctcatgtcatagctatgaactgttcgttggt
caggagaaagggaacgacgataacaacaaggagaggatgagcatacgttcgatcgagtca
gtcagcgagcatagagtgaaacagatcaacaatcacacggccaccactaaaccacggaaa
gtcagcgccgtctctcgcgccgctaatggccagtttacttatgcctaccaggaaagcctg
cggaaggcgagtcttagcctgcctggctcaccgttcaatctccgtcgaagcagccgcggt
agccatcagttcacgatcagaaatggccggggccgtttcgttggaccgccaggaggcgac
cggaagccgttggtcctgtcgacgttcctcgacgcccaggaacacctgccatacgcggac
gactcgaacgcggtcacgccaatgtccgaggagaatggcacgatcgtcgtgcccgtctac
tacgcgaatcttgggtccaggcactcgtcgtacacgtcacacgcatcacggctttcgtac
acgtcccatggtgatttgatcggtggaatagcaaacgcggggaaacctatgacgaaggag
agccagctgagaatcagatctgtcaggccaccatccgtgaatggccatttcacggattct
aatcagaagtaccattacgagggtgatctagaagatcccatgggcaaggcaaagcaacaa
gacaatccgtttatagagccttcacaacaacatgccgtagttgatatgaaagacgtgatg
gtgctgaacgatatcatagagcaggccgcgggtcgacaaagcagaacaccggagcaagga
gtttcgacctattactttccgacagacgacgatgaagaagggccaaagtttaaggacaaa
ttattggccgcggtgctacgttgcatcgatatcttctgcgtgtgggattgttgctggttg
tggcttgagtttcaaaaatacgtgtctcttgtggtgttcgatccattcgtagagttgttc
atcaccctttgtatcgtcgtcaatacattgttcatggcgctcgatcatcacgatatggac
aaggatatggaaaaagtgctcaagacaggaaactacttcttcacggcaacattcggtatc
gaggcaacgctgaaactgatagcaatgagtccgaagtattactttcaagaaggatggaat
attttcgacttcattatcgtcgctctttcgcttctcgagttgggattagaaggtgtccaa
ggtctctccgtattgcgatcgttcagattgttaagagtgttcaaactggcgaagtcgtgg
cctacattgaatctgctaatttccatcatgggcagaacagtaggcgcgctgggtaacctg
acgttcgtgttatgtatcatcatcttcattttcgccgtgatgggtatgcaactgtttgga
aagaactatacggacaatgtcgatcggttccccgatggagatctaccgagatggaatttc
accgattttatgcattcgttcatgatcgtgtttcgcgtactctgtggagagtggatcgag
tctatgtgggattgtatgcttgtgggcgacgtctcttgcataccattctttctggctact
gttgtcatcggtaatctggttgtgctgaatctcttcttggctttgttgctgagcaacttc
ggttcgtcgaatctatcggcgccgaccgcggacaacgatacgaacaagatcgcggaggcg
atcgatcgaatagcacgatttattaagtggatcaagcgaaatgtcctttatcttgctaaa
atgatgcgagccaaactcaccaatcagatatccgatcaggcgccaggtgagggaccgtcc
aacagttggaaagaagatggaattgatcgcgatggggacctagatcttgcagatggcgag
ctggatgcgtatagagataaaaagagtgccaaggagataaaccaactcgaagttgctatc
ggagatggaatggaatttaccatccatggagacctaaagaataaattgaagaagggtaaa
ctgtgcatgaacaacagcaaagttatagcaaattcgataaaccatcgtgactacaggctg
gacaacgattatattaatcagaacgaggatgataccatcagtaataaatcatatggcagc
cacaagaatagagcgttcaaggacgaaagtcataagggaagtatggactcgttggatggg
gaagaaaagaaggacgcgagtaaagaagacctggaacaagaagaagatcttggagaagag
ggggaggagggagaaggcgtcctaggggatgcaattatccaagcagacgaagatcccatc
gaatccgactatccggctgactgttgtccagaaaattgttacaagaaattcccgttctta
gctggtgacgatgacgctccattttggcagggttgggccaacttgagactgaagaccttc
caactaattgagaacaagtattttgagactgccgtcattttgatgatccttttgagtagt
atggctctcgccttggaagatgtgcatcttcaacaacgacccattctgcaagatatctta
tactacatggaccgaatatttactgtgattttcttcctcgaaatgttaatcaaatggttg
gctctcggcttcaaaaagtacttcacgaacgcttggtgctggcttgatttcatcattgtc
atggtgtcactcattaacttcgtagcgtcgctctgtggcgctggcgggatccaagccttc
aaaacaatgaggaccctaagggccctaaggccactcagggcgatgtctagaatgcaggga
atgcgggtagtcgtcaacgctttggttcaagccattccatccattttcaacgtgttactg
gtgtgtcttatcttctggttgatcttcgccattatgggtgtacagctttttgccggcaaa
tatttcaagtgcgtagatgccaataaaacaacactcagccacgaaataatccctgaccga
aacgcctgtttggctgagaactatacctgggagaattctccgatgaatttcgaccacgta
ggaaaggcttatctgtgcttgttccaagtggccacgtttaaaggatggattcagatcatg
aatgacgcgatagattctagggagctcaacaaacaaccaattcgtgaaacaaacatctac
atgtatttctattttgtattcttcattatattcggatcgttttttacccttaatctattc
attggtgtgatcatcgataacttcaacgagcagaagaaaaaggcgggtggttccctcgag
atgttcatgacggaagaccagaagaaatattacaacgctatgaaaaagatgggtagcaag
aaaccattgaaagccattccacgtccaagatggaggccgcaggcgatagtgtttgaaata
gtgacggacaaaaagttcgatatgataatcatgttgttcatcggactgaatatgcttacg
atgacgttggaccactatcaacaaactcagactttcagcgatgttctggactatctaaac
atgatattcattgtgatattcaccagcgagtgtctcatgaagatcttcgctctacgttac
cactatttcaaggagccatggaacctctttgattttgttgttgttatattgtcaatatta
ggtctggttctcagcgatattattgagaagtatttcgtatcgccgaccttgctccgtgta
gtaagggtggcaaaagtcggtcgtgtgcttcgactcgtgaaaggtgctaagggtattcga
actcttctcttcgccctggcgatgtcgttaccagctctcttcaatatttgcctattactg
tttttggtgatgtttatcttcgcgatttttggaatgtcattcttcatgcacgtgaaagac
aagagcggactggatgatgtatacaatttcaaaacgttcggccagtcgatgatattgcta
ttccagatgtcaacgtctgccggttgggatggcgtcctcgacggtataataaacgaggag
gactgccaggaaccgaacaacgagataggatatccgggcaactgtggttcgtccacgatc
ggcatcgcctatcttctctcgtacctggtgatcagcttcttgatcgtgataaacatgtac
atcgccgtgatcttggagaattactcccaagctaccgaggatgtgcaggagggtctgacg
gatgacgactacgacatgtactacgagatctggcaacagttcgacccagatggaacgcag
tacatcagatacgatcagctgtccgatttcttggacgtgctggagccgccgttacagata
cacaagccaaacaagtacaagatcgtatctatggacatcccaatatgcaagggggatatg
atgttctgcgtagacattctggatgctctcacgaaagacttcttcgcgcgcaagggtaat
ccgatcgaggagtcggcagagatcgaggttcagacgcgtccaggtgaggctggttacgaa
ccagtttcctcgactctgtggcgtcagcgtgaggagtattgcgcgcgtctgattcagaac
gcctggagaaagcacaagcaacaacgtctaggcggaccaagcgaagaaagcgacgacgct
gacaccgatccacgggtcagacagaccgcggtcttggtcgagagcgacggtttcgtgacg
aaaaatggccacagagtcgtcatacatagccgatcgccgagcgtaacctcgagaaccgcg
gacgtctga
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