Bombus pyrosoma: 122570957
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Entry
122570957 CDS
T07776
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122570957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122570957
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122570957
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122570957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Motif
Other DBs
NCBI-GeneID:
122570957
NCBI-ProteinID:
XP_043589958
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All DBs
Position
LG9:11740619..11745676
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AA seq
684 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGSTATIKSNLLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHTNSQAIHSTSSKTSSHSSENGLLSSSSASSVTSNVPQTTSQQHSNPVPIQTTHVL
HNQQNQNHSSETEMTTPIPPSSSPQSSVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLDIPPSESNRNIFDTAKANNNNSKVTMEAHIPPILSVAPLGPVPLQK
EHQLQFQLMEAAHYHMPDPSDSERLRSYLPRNSCVTPSYYQQSQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggag
ggtgtagagacatttgaagatatttggcaaaaggttcataatgctacaaacagcaatcag
aaggagaaatatgaagcagatctcaagaaagaaatcaaaaaacttcaaaggctacgtgat
cagattaaaacctggcttgcatcaggtgaaattaaggataaaagtacgcttcttgaatat
agaaagttaattgaaactcaaatggaaaggtttaaagttgtggagagagagacaaaaaca
aaagcttattcgaaagaaggattaggagctgctcaaaaacttgatccagctcaaaaagaa
cgagaagaagttagcaattggcttgcaaactctatagatgctttaaatcttcagctggat
acatttgaatccgagatagaatcattactcgcaggaaagaaaaaaaggttagataaagat
aagcaggataggatggatgaattaaaagcaaaacttgataaacatcgttaccatatccgt
aaattggaaacattgttacgcatgttggacaatatgtctgttgaagttaacactattaag
aggataaaagatgatgtagagtattatatcgaatcctcgcaggaacctgattttgaggaa
aatgaatatatctatgatgatattattggtctcgatgaagttgagctgtctggagttggt
attccctcatcagcaactacagatagtaataatagcaacgaaactggaggtacaccaacc
tcaactaactctggtacttcacccataccgtcgcctccattgagttctaccatgcataac
cactcaagtgatagttctacagataatgacaaaaaaacgaagcctgtgaaaccaacagca
gtcaggccattattaaattcacaggcgagcattccaaccacgggaagcactgccaccata
aaatcgaatttattatcaagcagcactccaagcaagaccattcccatgacacctagccat
agctcgcctagttctacaagtaatcacattgctacaactaatgctggtaattttgctacg
gtagctgcatcacatactaattcacaagccatccattctacctctagtaaaacatcttct
catagcagtgaaaatggtttattgtcatcatcgtctgcgtctagtgttacctcgaatgtg
ccacaaacaacctcgcagcagcacagtaatccagtgcccatacagacgacacacgtgttg
cataatcaacaaaatcagaatcacagcagcgaaactgaaatgacaacgccgatcccacca
tcttcttcgccacagtcatcagtcagcagtagatcttcacctttgcccgcaaattcctgc
tcgccagcgccatccactgccaatggtctcatccctaagcttcctgatggcatgtcctct
ttgaaatctatagcccaacaagtaattgtccgagcaggtttggacataccgccgtccgag
tcgaacagaaacatctttgacactgctaaggcgaacaataataacagcaaagtcaccatg
gaagcacacattcctcctattcttagcgttgcgcctctcgggccagtacctcttcagaaa
gaacaccagttgcagttccagttgatggaggccgcccactaccatatgcctgatccatct
gattctgaacgtttacgatcatatttaccaagaaattcgtgtgttacaccttcatattat
caacagagtcaacttccccattctgatactgtggagttcttccaacgtctttccacggaa
acattgttcttcatattttactacatggaaggttctaaaggccagtacctggctgcaaaa
gctctaaagaaacaaagttggaggtttcatacaaagtatatgatgtggtttcagaggcac
gaagaacccaaagtgatcaacgaggagtatgaacagggaacctacatttatttcgattat
gaaaagtggggacaaagaaaaaaggaaggttttacatttgagtacaagtacttagaggac
agagatctgaattaa
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