Bombus pyrosoma: 122571137
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Entry
122571137 CDS
T07776
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122571137
09123 Folding, sorting and degradation
03018 RNA degradation
122571137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122571137
03041 Spliceosome [BR:
bpyo03041
]
122571137
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122571137
mRNA degradation factors
5'-3' decay
Lsm complex
122571137
Spliceosome [BR:
bpyo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122571137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122571137
NCBI-ProteinID:
XP_043590430
LinkDB
All DBs
Position
LG9:6601693..6603458
Genome browser
AA seq
139 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGQSQRGRGSGRGTFGRGGRGPAAL
GRGGGNQGGNKSQNKARTK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttacctttgtcgttattaagaactgctcaaaaccatcctatgctagttgaacttaag
aatggagaaacgtataatggacatttagttagttgtgatagctggatgaatattaatctc
agagaggttatatgtacatccagggatggcgataaattttggagaatgcctgaatgttat
attcgaggtagtacaattaaatatttacgaattcctgatgaagtcatagatatggtaaaa
gaagatgtacaaatgaaatcgaggggacgtggagaaatgaaaggaagaggacaaagtcaa
cgaggtcgtggtagtggaagaggaacttttggtcgtggtggtagaggccctgctgctctt
ggtcgtggtggaggtaatcaaggaggaaacaaatctcaaaataaagcaagaaccaaataa
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