Bombus pyrosoma: 122571185
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Entry
122571185 CDS
T07776
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122571185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122571185
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122571185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
RSS_P20
AAA_27
Pro-kuma_activ
Motif
Other DBs
NCBI-GeneID:
122571185
NCBI-ProteinID:
XP_043590548
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All DBs
Position
LG1:complement(13596441..13608722)
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AA seq
921 aa
AA seq
DB search
MAVQPNQQFNMDPPSQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKT
TSVCKMIGAEPYKTEGVILNKNHFESFIRDLLLVKQYRVEVYVNQGSAKNQNWVLEYKGS
PGNLTQFEDTLFGNNDVAVSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESF
SNLESLVVTLAPKECLLIQGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTL
IRFKKGQQQNVQSLPEVNLSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDS
AAIKALNIESRVDTSSILNGNAPTSILGILDKCRTSQGHRLLAQWIRQPLKDLCLIKERH
DIVETLVNDNELRTNLSEDHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRLLEQ
LSNINVIALKTMFSDPLSELIKDMDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKELKN
TMDEVEAKLQSQLGKVANDLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNKKQYIILD
SNKSGVRFRSNKLNDLNDEYIVTRDKYTVEQKKVVTEIIEIAAGYSSTIKAIGNVLASLD
VLTAFASVAVSANKPYVRPEMLPTEAGEFNLTQVRHPCLEIQEGVDFIANDISFKRGECH
FCIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQLKGLS
TFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATH
FHEITKLEEEVSAVKNQHVTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEF
AKRKQAELEDYQDTVFEGSDNPQKKKDIIKEAEVLIAEFISKCRNLDKSLSDAELEDKIS
TFKREVLSHENPYIKTLLAAS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaaccaaatcaacaatttaatatggatccaccaagtcaacagagttttgtt
agattttttaaaaatctaccggaaaaacttaataccactatacgattttttaatagatca
gattattacacattacacggtaatgatgctttatttgctgcgcaagaagtttttaaaact
acgtcggtttgtaagatgataggagctgagccatacaaaaccgagggtgttattcttaac
aaaaatcattttgaatcttttatacgtgatctactgttagtaaaacaatatagagtagaa
gtttatgttaatcaaggatcggcaaaaaatcaaaattgggtattagaatataaaggttct
cctggaaatttaacacaatttgaagatacactgtttggcaataatgatgttgctgttagt
gtacatgtcatagcagtgaaattaggaatggaggcaaaatctagaattgttggcttaagc
tgtgtagatactacagcaacttcattttctgtttgtgaatttcaagacaatgaatcattt
tccaatttggaatcactggttgttacactcgctccaaaagaatgtttattaattcaaggc
gaaggcagttatgaattccaaactcttaaacaagtcatggaacgaaataatgtaatggtt
actacaagaaaaagaagtgaattttctagtgaatcagttatacaagatttaaatacttta
ataagattcaagaaaggtcaacaacaaaatgtacagtctttacctgaagtcaatttaagc
tttgctatgtcagctacttctgcgcttattaaatatttagatttaacatcagatgaaggg
aatttaaatcaatttgctatagaccaaataaaggagtcacgttatttaaagctagattca
gctgctataaaggcacttaatattgaatcacgcgttgatacctcttctattttaaatgga
aacgcacctacaagtattttgggtattttggataaatgtaggacttcacaaggtcataga
ttgcttgcacaatggattagacaacctttaaaagatttatgccttataaaagaaagacat
gatattgttgaaacactagtgaatgataatgaattacgaactaatcttagtgaagatcat
ttaagacgcataccggatttgcaagtgcttgcaaaaaaattggccagaaaaaaatcaact
ttacaagacctttataagatttacatgtgtatatcacatttgcctagattattagaacag
ctttctaatataaacgtaatagccttaaaaacaatgttcagtgatcctttgagtgaactt
attaaagacatggacaaatttcaacaaatggttgaacaaacaattgatttagattccgcc
gaaaaaggagatttcttagtacgagccgaatttgatgatgaattgaaagaattaaaaaat
actatggatgaagtggaggcgaaattacaatctcaattgggtaaagttgctaatgacctt
tcaatcgaagctggaaaaactctaaagctagaatcaaatcaacagcttggatattatttt
cgtgtaacattgaaagaagaaaaagtactaagaaataagaaacagtatattattctggat
tctaataaaagcggtgtacgatttcggagcaataaattaaatgatttaaatgatgaatac
attgtcactagagataaatatacagtggaacaaaaaaaggttgttacagaaataattgaa
attgcagctggttacagtagtacgataaaagctattggaaatgtattggcatctcttgac
gtacttactgcttttgcttctgttgctgtaagtgctaataaaccatatgtacgccctgaa
atgctacctaccgaagcgggtgagtttaatcttacacaagttcgacatccatgtttggaa
attcaagaaggagtagattttatagctaatgatatcagttttaaaagaggcgaatgtcat
ttttgcatcataactggtccaaatatgggaggtaaaagcacctatataagatctgctggt
gtcagtgctttaatggcacatattggaagctttgttccttgcgatcaagcaagaatatca
ttattggattgtatattagcccgtgtaggagctgatgattctcaattaaaagggctttct
acatttatgatggaaatgatagaaactgctgctatattaaaaacagcaacttgtaattcc
ctcgtgttaattgacgaattaggcagaggaacctctacttatgaaggttgcggtatagca
tggtcaatcgccgaatatttagcaaaagagatcaaatgctactgtctttttgcgacacat
tttcatgaaataactaaattagaagaagaagtatctgccgttaaaaatcaacacgttaca
gcccttgtagacgataataaattaactttattatataaagtaaaacctggtatatgtgat
caaagtttcggcatacatgtcgctaaaatggctaatttcccacaagatgttatagagttt
gctaagcgtaaacaagcagagcttgaagattaccaagacacagtttttgaaggttctgat
aatccacaaaaaaagaaagatattataaaggaagctgaagttcttattgcagaatttatt
agtaaatgcaggaatttggacaaatcattatctgatgcggaactagaagataaaatttca
acatttaaaagagaagttctatctcacgaaaatccctacataaagacacttctagcagct
tcttaa
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