Bombus pyrosoma: 122571464
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Entry
122571464 CDS
T07776
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122571464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122571464
Spliceosome [BR:
bpyo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122571464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
DSE1_N
Beta-prop_EIPR1
NBCH_WD40
ASA1
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_SCAP
Ge1_WD40
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
Nbas_N
Motif
Other DBs
NCBI-GeneID:
122571464
NCBI-ProteinID:
XP_043591157
LinkDB
All DBs
Position
LG1:4066101..4068731
Genome browser
AA seq
525 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLVAVAESSEEEKNTTNLGDNANATATLGNIHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLDEPICLFGEGPAD
RRTRLRELLANLGEDAIKKKHEEEEKPSHPIERDTETTWYHEGPDSLQIARSWIATYSLP
RAKARLGKARQDLELPTATRTARRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSKLLA
TASWSGLCKIWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEEVVGEKSGQTCVLASCAS
DGTVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQGDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTSKIWDLRKRSCVYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSN
KTWQPLKTLPGHDGKVMSVDISPDHKFIGTSSYDRTFKLWAPENM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacgaagatttggtttatgttaagaagcaaaagactgttcattatggatcc
ctcgaagaagcggagcgtgctagattggttgctgtggctgaatcttccgaagaagaaaaa
aataccacaaatttgggagataatgccaatgctacagctactttgggaaacattcacata
tcaaacgaatatatggaacttgaagatgaaatgtctaaagatagacaagctctcttagaa
gaatttgaacgtagaaagaaagctcgtcaaatcaacgtgtctactgatgattccgaagta
aagaaaaatttgagacaattggatgagcctatttgtctttttggtgaaggacctgcagat
aggagaacaagactgagggaattattggctaatttgggtgaagatgcaattaaaaagaaa
cacgaagaggaggagaaaccatcccatccaattgagagagacacagaaacaacatggtat
catgaagggccagactcactccaaatagcacgttcttggattgctacgtattcattgccc
agagcaaaggcgagattgggtaaggcaaggcaggatttggagttaccaacagctacgcgt
acagcacgccgtcaagagcttctgaaaaagttacaagctttgacaatttactgttctcaa
attggagatactaggccaatttctttctgtcagttcagtccaaattccaaattgctcgct
acagcttcatggtcaggcttgtgtaaaatatggtctgtacctgactgtactttgttaaga
acacttaaaggacacacttgtaatgttggctgcattgtttttcatccaaaagctactatt
actgaagaggtggtaggagaaaaatctggacagacttgtgtgttagcatcttgcgcttcg
gatggaacagtaaagttgtggagtggtggatctggggaggaacccttagctgaagtcgaa
ggacatgaaccgcacagagtttcaaggctagcatttcatccatctggcagatttcttggg
acatgttgctatgacgcatcttggagactttgggacttggaacagcaagcagaagtctta
catcaggaaggtcatgccagagctgtgcattgtattagttttcagggcgacggtagtgta
agcgccacaggtggtcatgactctttcggtcgagtgtgggatcttcgcacaggacggtgc
attatgtttatggaaggtcatttaaaatctatctttggtatcgatttctccccgaatgga
tttcacatagcaacagcgagcgaagataatacttctaagatatgggatttacgaaagaga
tcttgcgtgtatacgatacctgcgcacacaaatttactatcagacgtgaaataccaaaga
atagaaggacaatacctagtcacagcatcgtacgacaatactgcgaaaatatggtcaaat
aaaacctggcaaccacttaaaacgttaccaggtcacgatggtaaagttatgtccgtcgat
atttctcccgatcataaattcatcgggactagttcgtacgatcgaacgttcaaattgtgg
gctcctgaaaacatgtaa
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