Bombus pyrosoma: 122571488
Help
Entry
122571488 CDS
T07776
Name
(RefSeq) putative ATP-dependent RNA helicase Pl10
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122571488
03041 Spliceosome [BR:
bpyo03041
]
122571488
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122571488
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122571488
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122571488
mRNA cycle factors
Common to processing body (P body) and stress granule
122571488
Spliceosome [BR:
bpyo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122571488
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122571488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
122571488
NCBI-ProteinID:
XP_043591234
LinkDB
All DBs
Position
LG10:complement(10623226..10631249)
Genome browser
AA seq
703 aa
AA seq
DB search
MSNAANQNGSGLEQQLAGLDLQGSRQPSGGRYVAPHLRNKSGSNAPSGGDHHFSSNSRPY
SDRDRGRDRDRERERDRDRDRGRGGSAYRDTRSRDVDFGNFGNFGGRNRRSVNQENGRDY
RYANSDRDRERERDRQINSGNDRWQEQPRNDRWQESRNDHRMGGGRWKDDREGGRTNSEI
DWTIPTSRDERLEVELFGSGNTGINFSKYEDIPVEATGDNIPPHITSFDEVKLTEIIKNS
ITLAGYDKPTPVQKYAIPIIIGRRDVMACAQTGSGKTAAFLVPILNQIYESGPRAPPANT
SGKRKHFPLGLVLAPTRELATQIYDEARKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHL
LVATPGRLVDMLGRGKIGLHNCRYLVLDEADRMLDMGFEPQIRRIVQEDTMPPTGERQTL
MFSATFPKEIQMLARDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLEAGN
FSDSSAESLSLIFVETKKGADMLEEYLHQMGYPVTSIHGDRTQREREEALRRFRAGKAPI
LVATAVAARGLDIPHVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNSKNINLVR
DLVSLLIEANQELPPWLDDMFSEARYSGGGSRRPGSTKGRFSGGFGARDYRQTPSSGSAR
NNGSSNRPGSYGGSYGNYGGNYNSPYNSSANNVSGNDSDWWDK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcagccaaccagaatggatcaggtctagagcagcagttagctggtctggac
ttgcagggctcccgccaaccaagtgggggtcgctacgtagcaccgcatttgcgaaataaa
tctggaagtaacgcgccttctggcggtgatcaccatttttcttccaactcaagaccatat
tccgatagagatagaggaagagatcgcgatcgtgaaagggaaagggatagagatcgtgat
aggggaagaggtggttcagcctacagagatacacgctcccgtgacgtcgactttggaaat
ttcgggaattttggtgggcgcaacagacgtagtgtcaatcaagaaaatggaagagattat
agatacgccaattctgaccgtgaccgagagcgagagcgggatcgccaaattaattctgga
aatgatcgttggcaggaacaacctagaaatgatcgctggcaagagagcagaaacgatcac
agaatgggcggcggtagatggaaggacgatagagagggaggtagaacaaactctgaaatc
gactggacaattcccacttccagagatgagcgattggaggtggagttatttggtagtggc
aatactggcattaactttagtaaatatgaggatatcccggttgaggctactggggataac
atacctccacacatcacatcttttgacgaagttaagctgacggagataataaagaatagc
attactttggctggttatgataaacccacgccagtacagaaatatgcgataccgattatt
atcgggcgccgtgatgttatggcctgtgcccaaacggggtctggtaaaacagcggccttt
ttagtgccaatattaaatcagatttatgaaagcgggccacgtgcacctccagccaacact
tctggaaagcgtaaacatttccctcttggtctagtactagcacctacaagagagcttgct
acgcaaatatatgatgaggcgaggaaattcgcatatagatcacgcatgcgtcctgctgtt
gtttatggtggttcgaacattgtagatcaaatgcgagaattagatcgtggttgtcatctt
cttgttgcaacacctggtcgccttgtagatatgttagggcgaggtaaaattgggttgcat
aattgccgatatttagtattggacgaagcagatcgtatgttggatatgggtttcgagcca
caaataagacgtatagtccaggaggacacaatgcctcctaccggggaaaggcagacactt
atgttttcagctacgtttccgaaagaaattcaaatgttagcaagagacttcctcagtaac
tatatctttttagctgtaggccgtgttggttctacatctgaaaatattactcagaaaatc
gtatgggtggaagaacatgataagcgttcttatttgcttgaccttcttgaagctggcaac
ttctcagattcttctgctgagtcattgagtctaatatttgtggaaacaaagaaaggtgcg
gatatgttggaggaatatttacatcaaatgggatatccggtgactagcattcatggtgat
cggacacaacgtgaacgagaagaagctttgcgtcgcttccgagctggtaaagcgccaata
cttgttgctaccgctgttgctgcccgtgggcttgatattccacacgtgaagcacgtaatc
aacttcgatttgccgggagacgttgaagaatacgttcatcgaattggccgtactggtcgt
atgggaaatttaggtttagcaacgtcgttcttcaacagcaagaatattaacttggtgcgc
gatttggtatctcttctaattgaagctaatcaggaactacctccttggttagacgatatg
ttctctgaagcaagatactctggaggtggatctcgacggcctgggagtactaaaggccga
tttagcggcgggtttggtgctagagattatcgtcaaacaccaagttccggatctgcccgt
aataatggttcctccaataggcctggcagttatggaggaagttatggcaattacggaggt
aactataacagcccgtataatagttctgctaacaatgtcagcggtaatgattctgattgg
tgggacaagtaa
DBGET
integrated database retrieval system
