Bombus pyrosoma: 122572278
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Entry
122572278 CDS
T07776
Name
(RefSeq) transcription factor Sox-19b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpyo03000
]
122572278
Transcription factors [BR:
bpyo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122572278
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
122572278
NCBI-ProteinID:
XP_043593002
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Position
LG11:complement(10266890..10302448)
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AA seq
389 aa
AA seq
DB search
MRAGGNMCDGSFTETLRGMQGMSGTSPPGGAGVGPMGVGLGSPLGPTAKKAQVEHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEH
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGGMGQAGMGSYYGPAAAYGSLS
AASMAAAAAAAAQQSAAAMSAGLTAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLAMSMY
SDPKYLDSSPKSYLDRSYLDSAKAYFEQSKLYMDQKPAITDYNRPSYEHNKLYEESSPGS
IVGGGPTRSPAAESPDMSKQHERTEQGSSSASSTSTSSAASPGASLPAYYPGSVQTSGLL
GPQMSQYGGYQTAPAPGNESFRRPLTVIF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggctcgttcaccgagaccctgcgcggtatgcag
ggcatgtcgggtacgtcgccacccggtggagcgggggtcggccccatgggggttggcctc
ggcagccctcttgggccgaccgcgaagaaggcgcaggtggaacacattaagaggccgatg
aacgcattcatggtatggtcacgattacaacgacggaagatcgcgcaggagaacccgaaa
atgcacaactccgagatatccaagaggctcggtgccgaatggaaactcttaactgaggac
gagaaacgacccttcatcgatcaggcgaaaaggttacgagcacagcacatgaaggaacac
cccgattacaagtacagacctagaagaaagccgaaaaccttacgaaaggaaggttatcct
tacagtattccgtatcctagtgtgcccatggatgcgctccgagctggaatggctggtgga
atgggacaggcaggaatgggatcgtattatggtccagcggccgcttatggttcactctct
gcagccagcatggccgcagccgctgctgcagcagcacagcaatccgcagcggcgatgtct
gcgggtctaacagcacctgctcaggtggtgagctcgatggacgccatgaagtactcgatg
gaggccgacaagtaccgagcagcatacatgccgccgagcactctggcgatgagcatgtac
tccgaccccaagtacctggactcgagtccaaagtcgtacctagaccggagctacttagac
tccgcgaaggcgtatttcgaacaatcgaagctctacatggaccagaagcctgcgatcacc
gactacaatcggcccagttacgagcacaacaagctttacgaagagtccagccccggtagt
atcgtcggtggtggtccaacaaggtcaccagccgcagagtctccggacatgagcaaacag
cacgagaggaccgagcaaggttcctctagcgcgagttctacgtctacctcgtcggctgcg
agtcctggtgccagtctgccagcctattatccaggctcggtacaaaccagcggcctatta
ggaccccaaatgagccaatacggcggctatcaaacagctccagcgcctggaaacgaatcg
ttcagacgacccctcactgtcatcttctga
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