KEGG   Bombus pyrosoma: 122572403
Entry
122572403         CDS       T07776                                 
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122572403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpyo03021]
    122572403
   03019 Messenger RNA biogenesis [BR:bpyo03019]
    122572403
Transcription machinery [BR:bpyo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     122572403
Messenger RNA biogenesis [BR:bpyo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     122572403
    U7-dependent histone pre-mRNA processing factors
     122572403
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N HEAT_2
Other DBs
NCBI-GeneID: 122572403
NCBI-ProteinID: XP_043593270
LinkDB
Position
LG11:15547395..15552982
AA seq 1111 aa
MDPRIHRRTEPEKGPGDLIVEWLNEASLNPGEDIKVANLCKVQEILINKEPQLLPLYLDE
ALQFSLDRNAEVRKTITGFIEEAGVKQPEIIPRVVQVLLRLVSDESSAVAKRALRASGRI
LRAALKWISSAITVTPEMEVAWNQLSALKIQIINMIDSDNDGIRTQAVKFLEGVVLIQTY
PDPDIPKKSDDFSLEDIPLTLKIARRRKLEEEANDVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKTRPQFMPGVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPASIEFAS
TIAKQLTQLGAKEQEILKAYPKPEDIRRMKKRQQEAAASSAAKRVKIETSLIPDESEIVA
SLVPSSKVPELVELSESFIAERLSVDIVTDLVMDSMAWVPDTMTTIFQREYQPSSTTDIN
IQRQTIAKLLAAQIRQAKTKKKKDAKDEDAVMEDLVKNPTISVAEAKRERKREKDREKEK
EAKASLEAHEKSLAKARTRLKALKLSEVTKPLSKEIKERMLLMAVNRILLSEKTAVFGGV
AAIRSKILTTLAATFNPYIKEAVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLCT
KPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLYRLYLEAPLITEDAVEALKMVSSDETR
GLMPLQLLKEMVIRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLIEE
YAVLYLGFLRLHTPPEIVFGQDRGRPQVETQWTESTTRACLGLYLALLSEHQDLIHELAR
VYTSMGADVKRIVLRLVEGPVRSLGMGSPQLLSLVENCPKGAETLVTRIIHILTEKSAPS
VELVARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTHN
NESGVPHTSPITPAELLIALHNIDPSKAELKTVIKATSLCFAEKQIYTQETVAVVMQHLM
EMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQS
FAVILQLPPAQLAEALKMASNLRAPLLAHVEAFAENQKAHIPQSIMDVIQGKSPCDIHDE
FDIAPPGDYPIEQKPDTMETDISEPAPPGLD
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggatcctcgaatacatagaagaacagagccggaaaaaggaccgggcgatttgatagtt
gaatggttaaatgaggcttcactaaacccaggagaagatataaaagttgcaaatttatgt
aaagttcaggaaatattaataaacaaggagccacaattacttccattatatttggatgaa
gcattacagttttccttagataggaatgcagaagttaggaaaacaattacaggtttcata
gaagaggctggtgtaaaacaacctgagataattccacgtgtagttcaggtacttttaaga
ctagtttctgatgaatcatcggctgttgctaaaagagctcttagagctagtggcagaata
ttaagagctgcattgaaatggatatccagcgccattacagttacgccagaaatggaagtt
gcatggaatcaacttagtgctctcaaaattcaaattataaatatgattgacagtgacaat
gatgggattagaacacaagctgtgaaatttcttgaaggtgttgttttgatacaaacatac
cctgacccagatataccaaaaaagtcggatgatttttctttagaagatattccattaaca
ttaaaaatagcacgcagacgcaaattagaggaagaagctaatgatgtaatggacttatta
atcaaatttcatgggtctccacacgttagtagcgttaatttgatgacatgcatgggatct
ttagcattgatcgctaaaacaagacctcagtttatgcctggtgtaatacaagctttgcaa
aggttacaacatgatttaccacccacgttatctgattctcaagtaactagtgttcaaaaa
caattaaaattaactctattaggactgatgaagcatccagctagcatagaatttgcatcc
acaatagctaaacaactgacccaattgggagcaaaagaacaagaaattcttaaagcttat
ccaaaaccagaagatattcgacgtatgaagaaacgacaacaagaagcagcagcgtcttcc
gctgcaaagcgtgttaaaatcgaaacttctttaataccagatgaatcagaaattgtggct
agtttagtacccagctcaaaagtaccagaattggttgaactttcagaaagttttattgct
gaaagattaagtgtagacattgttacagatttagtaatggatagcatggcgtgggtccca
gacacaatgacaacgatttttcaaagagaatatcagccttcttcaacgaccgatataaat
attcaacgacaaacgattgctaaattactagcggcacaaataagacaagctaaaacaaag
aaaaaaaaggatgcaaaggatgaagatgctgtgatggaagatttagtgaaaaatccaacc
atcagcgtagcggaagcaaaacgagagcggaaacgtgaaaaagatagggaaaaagaaaaa
gaagcaaaggcatctctggaagcacatgaaaaatcgcttgcgaaggcaagaactcgttta
aaagccttgaaattatccgaagttacaaaaccattatcaaaagaaattaaagaaagaatg
ttactgatggctgtgaatcgaattttactttctgagaagacagctgtatttggcggcgta
gcagccataagatcaaaaattttaactactctagcggcaacatttaatccatacattaaa
gaagcagtattacgttatattactgacgatatgagaaatcgtttagacttagctttaggt
tggttgtatgaagaatatgcattacttcagggtttccaaagacgaactacattatgtaca
aagccccaagaagctccgcatcaggcttacaattttttattatgtactttagtatctgca
atagatttagttcaaggcaaagatcgtgacacattactatataggctatacttggaagct
ccattaatcaccgaagatgcagttgaggctttgaaaatggtgtcttctgatgaaacaaga
ggactgatgccgttacaattattaaaagaaatggttattcgtagaccaacaaaacaatta
gttttcctaaacgtattgttatgtcatactggccatgaaaacaatacgataagggaagcc
gctatacagctagtttgtcaactatatagtcgtcctgaattaagtaaactcatagaggag
tatgcagttctctatttaggtttcttacgactacatacaccacctgagatcgtctttgga
caagatcgaggtagaccgcaagtagaaactcagtggactgagtcaactacaagagcttgt
cttggattatatcttgctctgttaagtgaacatcaagatttaattcatgaattggctaga
gtttatacatcgatgggtgcagacgtaaaacgtatcgttcttcgattagtagaagggcct
gtaagatctttaggaatggggagtccacaattgttgtcattagttgaaaattgccctaaa
ggcgctgaaacactagttacaagaattattcatatccttacagaaaaatctgcaccgagt
gtagaattagtagcaagagtacgtgaactttatcagaccagggtttcagatgttcgattc
ttaataccagttttaaatggtttaacgaagaaagaagttatagctgctcttccaaaactc
ataaaattaaatcctattgttgttaaagaggtattcaatagactgctaggcactcataat
aacgaaagtggcgtacctcatacatctcctatcacgcctgctgaattattaatagctttg
cataatatagatccaagcaaagcagaattgaaaacagttataaaagctacgtccctatgt
tttgcggaaaaacaaatatatacacaagaaactgtagctgttgtaatgcaacatcttatg
gagatgacccctcttcctacattactcatgcgtacagtgatacaaagtttagcattatat
cctaggttaagtggattcgttatgaatatacttcaacgattaattctcaaacaagtttgg
aaacagccaaaagtatgggagggttttgtaaaatgttgtgaacgtacgcaaccacaaagt
tttgcggttattttacaacttcctccagcacaattggccgaagcgttaaaaatggcgagt
aatttacgtgcaccattattagcgcatgtcgaagcctttgccgaaaatcagaaagcgcac
attccgcaatcaataatggatgttattcagggtaaatcaccttgcgacatacatgatgaa
tttgatattgcaccacccggtgattatccgatcgaacaaaaaccagatactatggaaact
gatatttcagaaccagctccgcctggtttagattag

DBGET integrated database retrieval system