Bombus pyrosoma: 122572598
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Entry
122572598 CDS
T07776
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122572598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpyo04131
]
122572598
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpyo04147
]
122572598
Membrane trafficking [BR:
bpyo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
122572598
Exosome [BR:
bpyo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122572598
Exosomal proteins of colorectal cancer cells
122572598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
122572598
NCBI-ProteinID:
XP_043593673
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Position
LG2:complement(4432043..4434128)
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AA seq
402 aa
AA seq
DB search
MNRFEYADSRLLPNEIYIRRDVSICIYDGDIKTNFESGELVLTSHRFLWGRPGDISRGHT
CLSLSLRHIVFFEEEIPGPFSFGRSKKVVIHLSEAPIDKMPGPLDNSVCNYIKFSFKEGL
DPNFHTHLSDAVTRRIWEFTPIVPLEHPDSNTKNSRDINKPLPQIKTRTGIIGIERSLQE
QQKATDESISMAFQDLKKLMEVAKDMVSISKTISAKIRERQGDITEDETVRFKSYLMSLG
IDDPVTRDAYKSSNEYFKQLAKQLANILEEPIKEVGGMITLTDVYCRVNRARGLELLSPE
DLLNASRQLASLGLPIVLRVFDSGVMVLQSRSHDDNVIVDVIADLIKERGSLTAEELAQS
EGISVLLARERLLVTEKRGKACRDDTIEALRFYPNLFLGKND
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatagatttgaatacgctgattctcgacttcttccgaatgaaatttatataagacgc
gatgttagcatatgcatatacgatggtgatatcaagacaaattttgaaagcggtgaatta
gtacttaccagccacagatttctttggggaagacctggtgatatatcacgcggtcataca
tgcctttcgttatcccttcgtcatatagttttcttcgaggaagaaattcctggaccattt
tcctttggacgcagtaaaaaagttgttatacacctttctgaagctccgatcgataaaatg
cctggtccgttggataatagcgtatgcaactatattaaattctcgtttaaagaaggtttg
gatccaaattttcatacacatttgtccgatgctgttacgagacgaatttgggaatttaca
cctatcgtgcctctggaacatcctgatagcaacacaaaaaatagcagagacattaataag
cctctgccacaaataaagacacgaaccggtatcataggtattgaaagaagccttcaggaa
caacagaaggcaacagacgaaagcatatcaatggcttttcaagatcttaagaagctcatg
gaagtagccaaagacatggtttccatttcaaaaaccatctcggcaaaaatacgggagaga
caaggagacatcacagaggatgaaacggttagatttaagtcctatttaatgagtcttggc
attgatgaccctgttaccagagatgcgtataaaagtagtaacgaatatttcaagcaattg
gcaaaacaacttgcaaatattttagaagagccaattaaagaagttgggggaatgataaca
ttaacagatgtttattgtcgtgtaaacagagctagaggtttagaacttctttcgccagaa
gatttactaaatgccagtagacaattagcatctttaggtttacctatagtattgagagtg
tttgatagcggagttatggttcttcaatctcgatcgcacgatgataatgtcatagttgat
gttatagcagatctaataaaagaaagagggtctctaacagcagaagaacttgctcaatcg
gagggtatatcggtccttttagcgcgcgaaagactgctagtcacggaaaaaagaggaaaa
gcatgcagagacgatacaattgaagctttaagattttaccctaatttatttttgggaaaa
aatgattaa
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