Bombus pyrosoma: 122572652
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Entry
122572652 CDS
T07776
Name
(RefSeq) PMS1 protein homolog 1-like isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122572652
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122572652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box
Motif
Other DBs
NCBI-GeneID:
122572652
NCBI-ProteinID:
XP_043593823
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Position
LG11:2314549..2317989
Genome browser
AA seq
784 aa
AA seq
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MIISALDKDTVKLITTTQVITSISTAVKELIENAFDAGAKNIEINLIDNGCTLIEVKDDG
CGISKVDAPYMALSSYTSKLSSFSDLESLETYGFRGEALYALSAVSDLTIISKTEQDEAA
ISYTIDHNGHIINSEHCHRSTGTTVQVKQLFKQMPVRRQIITNLKKANQDIRTLESLIKS
YGICKFNARINYKVNNNIIFAKPSISNLEEAVTYTLGKKITCCMNWIDITDTDIKIKIMV
PSRMTQATEVLHSGGQYIFVNDRPIKYKELEKVVIKIIFEALGQESSTRKKPIFLVYILI
NAANIDVNLEPNKTSLLFKEQNVVINIIEKYLENFYGIQREMQPENNCESSFTDYQDYTQ
KVNINNTENEEPACKKRKLRLEGNFDKPIERNINTDENVINNLNSTEINNFEHKGRPQVS
INMQICDDESAENEKKVDDLSIQLPSLDLSESDSNESQNFVLTYSNNDISHNSVDSNTKE
NTEDTPPFELSPSSETFSQLPIVDLGEDFVLFDSSNTNTDEKENKIKNAETNALHAENKL
DMKKSIMLKEWSKGHVSELEGGTNVESYNYIKLKESPNIDSHTNLCAGFLKFSKYARSED
SNMTAPQIAYQITNLWKKLSPEERGYYRDLAHDEKSEHNKSKLETKEKCIVNINKNKNRL
LKALEKMKTMNMEKKENLVMRTTVSWDIDLKKVTENFLDSPPCENTDVVVVGLLRKNLWI
VYKSAHIWILDAENLKKKLHITDMNVNEDNAKNIEQLLQQWFSIKNDISLLHPIHSLTQI
RDTL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatcatctcagctttagacaaagacacagtgaaactaataactaccactcaagttata
acttcgatatctactgctgtaaaagaattaatagaaaatgcgtttgatgctggtgctaaa
aatattgaaattaacttgatagataatggatgtacattaatagaagtaaaggacgatgga
tgcggtatttcaaaagtagatgctccttacatggctttatcatcttacacatcaaaattg
tctagtttctccgatttagaatctttagaaacatacggattcagaggtgaggctttatac
gcattgagtgcagtatcggatcttacgatcatatcaaaaacagaacaagatgaagcagct
atatcttatactatagatcataatggtcatatcataaattcagaacattgccacagatct
acaggaacaactgtacaagttaaacaattatttaaacaaatgccagtgagaaggcaaata
attacaaatttaaagaaagctaatcaagatattagaactttggagtctttaataaaaagt
tacggaatatgcaaatttaatgcacgaataaattataaagtaaataataacataatattt
gcaaaacctagtataagtaatcttgaagaagcagttacatatactcttggtaaaaaaata
acatgctgtatgaattggatagatattacagatacagatattaaaattaaaataatggtt
ccttcaaggatgacacaagcaactgaagtgttacattctggaggacaatatatttttgtg
aatgatagaccaattaaatataaagaattagagaaggtagtgattaaaataattttcgag
gcattaggacaagaatcgtcaacaaggaaaaaaccaatatttcttgtatatattttaata
aatgcagcaaacatagacgttaatctagaaccaaataaaacttctctcctttttaaggaa
cagaacgtggttatcaatataatagaaaaatatttagaaaatttttatggaatacaaaga
gaaatgcaaccagaaaacaattgcgaaagttcatttactgattaccaagattatacacaa
aaagtaaacattaacaatactgaaaatgaggaacctgcatgcaaaaaacgaaaattacga
ttagaaggaaattttgataaacctattgaaaggaatataaataccgatgaaaatgtaata
aataatttaaattctaccgagattaataatttcgagcataaaggacgaccgcaagtttct
ataaatatgcaaatttgtgatgacgaaagtgctgaaaatgaaaaaaaagtagatgacctc
agtattcaattaccatctctagatttaagtgaatcagattcaaatgaatcacagaatttt
gtattgacttattccaataacgatatttctcataattcagttgatagtaatacaaaagaa
aacacagaagatactccaccatttgaactaagtccatcatctgaaacattcagtcagtta
cctatagtagatctaggtgaggattttgtattgttcgattcttctaatacaaatacagat
gagaaagaaaataagataaaaaatgcggaaacaaacgctttgcatgcagagaataaattg
gatatgaaaaagtcaattatgttaaaagaatggagtaaaggacacgtatctgaattggag
ggaggtacaaatgtagaatcttacaattatataaaactaaaggagtcaccaaatatcgat
tcacatacaaatttatgtgcaggttttcttaaattttcaaaatatgccaggtcagaagat
tctaatatgacagcacctcaaattgcttatcaaataactaatctttggaaaaagttgtca
cctgaagaacgtggatactatagagacctagcacacgatgagaaatcagagcacaacaaa
agcaaactggaaacaaaagaaaaatgtatagtaaatattaataaaaataaaaatagacta
ttaaaagcattggaaaaaatgaaaacaatgaatatggagaaaaaagaaaatttagtcatg
agaactactgtatcttgggatatagatttaaaaaaagttactgaaaattttctagatagt
cctccgtgtgaaaatactgacgttgttgttgttggattattacgtaaaaatttatggatt
gtttataaatctgcacatatttggattttagatgctgaaaatcttaaaaaaaaattacat
ataactgatatgaatgtgaatgaggataatgctaagaatatagaacaacttttacagcaa
tggttttcaataaaaaatgacatatctttattacatcctatacattcattaacacaaatc
agggatactctttag
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