Bombus pyrosoma: 122572784
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Entry
122572784 CDS
T07776
Name
(RefSeq) nuclear pore complex protein DDB_G0274915-like isoform X1
KO
K18716
nucleoporin NUP42
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122572784
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122572784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
122572784
NCBI-ProteinID:
XP_043594166
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Position
LG11:complement(15426879..15429953)
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AA seq
626 aa
AA seq
DB search
MVVCKYYRQGNCRFGQYCQFEHINTFGGNNKVDSYNEDEYIAVLVAKEMLNAERGRQWLL
SCFAPFKDKPCIPGMEDLSQEEVRWEMYQAQNNGMVDQAKLHFQQLCTDMKAKREAFKNP
TRETLTKLKEILGTGHKNARNDNTSGKSSSFAFATPQLGLPSSTPSSNVFGNKTFGTQSN
PFSGGFPPTSNTSIFGRTPTTSNSVFGSTPTFGSNLGVFGGGTSTNTVFGGITNTSTFNA
GQNTQTFGSSGSIFGGGASQPVFGQPSIFGTGNPVNNVFARHETSQAPISVFNSGATSSP
SLFSGTSSQSNASVFAGAKTSTANPFGGSSNLQTTNSIFGSTPSTGTFSSGIFSQSETPA
FGGAPVFGASATFGNNPTSIFGEKPAFGNSGSIFGGSNTTTPAFSSAQPTNAFGVTTSTS
SVNLFGNAQGTTPSMPTSSASPFSATPSTTTSPFATATSQFETTSTAAFSKPTFGMATET
AGETFATTATSSSTPFGTTNTGVTFGTSSTTTSPFTSTIFSDITSSPFSPTSVTSTATTT
NSFTPQQQQITSPFGTFAQNQTSNTATSTHEPFGKSTFGVTLTAIIIDDNIYSLDNQLTD
DEKNMYMAEKFIFGKIPLKPPTKDIR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaatactatcgacaaggaaattgtcgatttggacaatattgtcaattc
gaacatataaatacttttggaggtaataacaaagttgactcttacaatgaggatgaatat
attgcggtgttggttgcaaaagaaatgctcaatgcagaaagaggaagacaatggttactg
tcatgttttgcgccatttaaggacaaaccgtgtattcctggcatggaagacttgtctcag
gaagaagttcgatgggagatgtaccaagctcaaaataatgggatggtagatcaggcaaaa
ttacatttccaacaactgtgtacagatatgaaagcaaaaagagaagctttcaagaatcct
acccgtgaaacactaactaaacttaaagagattctaggtacaggacacaagaatgccagg
aatgataatacatctgggaaatcctctagttttgcttttgcaactcctcaacttggactt
ccaagcagtactccatcctccaatgtatttggaaacaagacatttggaactcagagcaat
ccattcagcggtggtttcccgcccactagcaatacatcaatctttgggagaacacctaca
acttcaaattctgtatttggtagtacaccaacttttggcagtaatttaggagtgtttggt
ggtggtaccagcactaatactgtatttggtgggattacaaatacttctacatttaatgca
ggacaaaacacgcagacttttggatcgtccggctcgatttttggcggcggagcttcccaa
cccgttttcgggcagcctagcatatttggaaccggcaatccagtgaacaatgttttcgcc
aggcatgaaacgtcccaggcgcccatatcagtattcaatagcggagcaacatcttctccc
tctttatttagtggcacttcttctcaatctaacgcttctgtatttgccggagctaaaact
tctactgctaatccgtttggcggctcttcaaatttacagacaactaactccatcttcgga
tcgactccgtccaccggaaccttcagttcaggcatattctcgcagtctgaaacacctgca
tttgggggagcaccagtatttggtgcttcagcaacctttgggaacaatcccacttcgata
tttggcgagaaaccggcatttggaaattctggtagtattttcggcggatccaataccacg
acacctgcctttagttcggcacagcctacaaacgcttttggtgttaccacttctacatct
tccgtaaatctattcggaaatgctcagggtaccacgccctctatgcccacttccagtgct
tcaccatttagcgcaacaccttcaacgactacgagtccttttgctaccgcaacctcgcaa
tttgaaaccaccagtacggcagccttctcgaagcctacgtttgggatggctacggaaact
gcgggtgaaacgtttgctactacagctacttcctctagcacaccgtttggtactacaaat
accggagttacttttggtacttctagtaccaccacttctcctttcacatcgacgatattt
agcgatataacgagctcaccatttagtcctacgagcgttacgtctacagctacaaccaca
aattcgtttacaccgcagcaacaacaaattacttctccatttggtacttttgcacaaaat
caaacttctaatactgctacgtctacgcacgaaccgtttggaaaatcgacattcggagta
acgctgacggcaatcattatcgacgacaacatttattcgttagacaatcaactaacagac
gacgagaaaaacatgtacatggcggagaaatttatttttggaaagattccgctgaagccg
cctaccaaagacattagataa
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