Bombus pyrosoma: 122572900
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Entry
122572900 CDS
T07776
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122572900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122572900
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122572900
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122572900
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122572900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122572900
NCBI-ProteinID:
XP_043594492
LinkDB
All DBs
Position
LG11:complement(1992348..2002467)
Genome browser
AA seq
1886 aa
AA seq
DB search
MFGQTGNTSFSSFNTPTQSSPFGQSAFGKPITTTSFGSGATPVFGSGNTSLFSSKPAGST
TGGLFGNTTTPPAFTQPSFGGFGTTNTNTNLFGSQQNASTNLFGTNTATSAFGQSNKPAG
FGFGTTSGTNLFGQPQQSAQQTTPFGQSSTTGNTNLFGATPGFGNTNTATTSITGTVVKF
APMITTDSMSKNGISHTISVRHCCIATMKEYESKSYEELRFEDYSVGRKGPSTGIFGAPA
QPSPFGNAGAGTSTATTGFGGMSAGFGATTQSGSSGLFGKPISTFGTPSTTTTNNFAFNS
TPSTNLFGTNTQNKPFGILSTAAAPTPLFATSNTNQTAGTGFGGINTGQNTAFGSAFGST
QPNQSIGLFNQNKSAFNAPSTSSSTGFSTFGQTPMSNTGTPLFCSKSTGTIGFGVNSTFG
STAPSTFGTAPGFTAGQNSGTSLFNTPFKPAGQTSGFSFGSTSTPSSGLGTNTGLMLGSG
STLFGQQKSSGLFGNSGNNAPFNTSGSFGSSTFGNNTNVGAGIGTGLLGAGNTTNQVKSS
GTVPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPANAPSKLMNGQQYKVTADNKS
PKIKAKVVTPAQLSKKSMFEGLEEEDPLSEAFQPRPNAKRLVLRPKSISNSIVPSPTESS
QTVGRNLQSSGKGEEKSSVTNTYIENTTIETVDKENHSQDNNRQLVNDRRSSLSWLKTSL
PRNAKNLDEESYEAQRSLFSSPNALSEEMINNTVTELRPYANANSSNQKCSEINTSVDTS
LKNSSLVDKTCTDIVTQNSDSSQELDENSFSTLQTSNWKPNAAKVTLKRAGYYTIPPLDK
LDEYVRGETCIVPNFTVGREDYGNVYFPESFDIYGLNLDEIVHFRHKEVIIYPDDEKKPP
SGEGLNRKAQVTLDQVWPHDKSLHKPITDPHRLAAMDYEEKLRRVSAKHDTRFLEYRPET
GSWVFKVDHFSKYGLSDSDEEDNNVPTANDTKRLKLCATQQKCATKQEQSKVVSNKDTSK
ANDLKTANTDYSDLDTRGLLLEAIVSRRSFRTDQNREKQLPISPTGENARILGTDSHKLQ
LMKASFFDGSDEEINEAYDQESNRALFLPDRRSSLRCFTNTPQKLDEDQNYEPIYSPMLR
SNLAIHRTPTIAYEESTLSKTDSKLERSMDIVVKTSTIYEKGLPDPSITPVTTILRCISE
VIPLSKSIIHKLESRSVADIGIQMGRRFKPSWGRGLTLLTLSTKKQADDVLLNNSFEQIG
SYVCGRSPEDTTSVGIVQRIQILGGSGTGEERIKTFKESIEGHLKIQLSHRVMNPDGDCL
IFDVDTDINKASMALHAHCSLAEEFAEQFATDSFASYVANVWKLCVALWGNLPDVNVAAE
NSEEHSVVIARREAIGEWLRNVIRKTLVLEDTDINYETKILLLLSAFELEEACKIAREMG
DHCLALLMAQLCSGMPIKVLTQQQIALWQNAGVDENLSLDRLKLFALVAGEPPSKHCPIN
VCEGFDWKRSLAVHLWYFSSPTASIRDILDIYEASFDTTKTNDVYTSIPKPEYKGNDFEL
EINNGKPIYDLCFHLLKLFCTGNHTLGELLNPATHTADPMDYRLSWLMQQVLLALGYSHL
SEHVAILTHVNFATQLEAYDLWHWAIFVMLHLKDAAKRKTAVMNLLQRHVEIDDASDCPD
FIERETFLREELGIPSIWIHHAKAVKSYVAKRYGKAAFYFIQAEQWNKAHEIIIEHLAAD
VIINENYDYLRSLLRPLTPLECSSTISGWTYQGQLLWEYMEITMNVESLLRSADPRGISS
KLESLKQRLSNLPSKINQFPCLTAKHRLCQAEIAKRTIHLARSLLQLNENKSTSIYQLVS
QLPLPEDYAQQELRFVINMCVNEIIY
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcaaactggaaatacctcttttagtagttttaatacaccaacgcaatccagc
ccatttgggcaatctgcgtttggtaaaccaatcactacaacaagttttggttctggtgct
acaccagtctttggcagtggcaatacttctctctttagttcaaagcctgcaggttctacc
actggtggcttgtttggcaatactacaactccacctgcatttactcaaccatcttttgga
gggtttggtacaacaaatacaaataccaatttatttggctcccagcagaatgcaagtaca
aatctttttggtacaaacactgcaacgtcagcatttggtcaatcgaataaaccagctgga
tttggttttggtaccacatctggtacaaatttatttgggcaaccccaacaatcagctcag
caaaccacaccttttgggcaaagcagtaccactggaaatacaaatttatttggtgcaaca
cctggttttggcaatacgaacacagcaaccacaagtataactggtactgtcgttaaattt
gctcctatgattactaccgattccatgtccaagaatggtatatctcatactatatcggtg
agacattgttgcattgcgacaatgaaagaatatgaatcaaagtcttacgaagagttacgt
tttgaagattattctgtgggacgaaaaggacccagtacaggaatctttggtgcaccagca
caaccttcaccttttggtaatgcaggggcaggtactagtactgcaacaacgggctttggt
ggaatgagcgctggttttggagcgaccacacagtctggctcaagtggtctctttggaaag
cctataagtacttttggtacaccctcgacaacaacaacaaataattttgcttttaattct
actccaagcactaatctgtttggtactaatacccagaataaaccatttggtatcttatct
acagcagcagctccaaccccactttttgcaaccagcaatactaaccaaactgctggtaca
ggtttcggtggcattaatacgggtcaaaatactgctttcggctccgcatttggttcaacg
caaccgaatcagagtattggtctatttaaccaaaacaaatcagcttttaatgcaccttcc
acatcgtctagcactgggttttccacttttggtcagacaccaatgagcaatacgggtaca
cctttattctgttctaaatcaactggaacgataggtttcggggtaaattcgactttcggt
tcgactgcaccatcgacttttggaactgcaccaggcttcactgcaggtcaaaattccggt
acttcgttgtttaatacaccttttaagcctgcaggacaaacatctggattttcttttggt
tcaacttctacaccatcgtccggactcggtacaaatacgggtttaatgttgggtagtggc
tctactttatttggtcagcaaaaatcaagcggtttgttcgggaacagtggcaataatgca
ccatttaatacatcggggtcgtttggatcttcaacttttggaaataatacaaatgtagga
gcgggtattgggactggattactcggagctggaaatactacgaaccaagtcaaaagttcc
ggaactgtgccggtgcatcaacaaattttagctttggtgtctgcacctttcggcgattca
ccgttattaaaaaatcttttaccagcttccggtaaaacagaagagttattaaaaccggca
aacgcgccatccaaattaatgaatggtcaacagtataaggttactgctgataataagtct
ccgaaaatcaaggccaaagttgttactcctgcacagttatctaagaagtcaatgttcgaa
ggtcttgaagaggaagatccactctcggaagcatttcagcctcgtccaaatgcaaagcgt
ttggtactacgtccgaaatccatatcgaactcaatagttccatcgcccacagaaagttca
caaactgtagggagaaacttacaatcttccggaaaaggagaagagaaatcatctgtaaca
aatacatatatcgaaaatacaactatcgaaactgtagataaagaaaatcatagtcaagat
aataatcgacaattagtaaacgatcgaagatcatctttgtcttggttgaaaacgagcctt
ccacgaaatgcaaaaaatttagacgaagaatcatacgaggctcaacggtcgctattttct
agtccgaacgcattgtccgaagagatgataaacaatactgttactgaattgcgaccttat
gctaacgccaattcatcaaatcaaaagtgctctgaaattaatacatctgtggatacgtct
ttaaagaattcatctctcgttgataaaacatgtacggacattgtgactcaaaactctgat
tcgagtcaagaattggacgaaaattccttttcgacgttgcaaacttcaaactggaaacca
aacgcggctaaagtaacactgaaacgtgctggttactatacaattccgccgcttgataaa
ttagacgagtatgttcgcggtgaaacgtgtattgtaccaaacttcactgttgggcgtgaa
gattatgggaatgtgtatttccctgaatcgtttgatatatatggcttgaatttagacgaa
attgtacattttcgacacaaggaagtcatcatttatccagatgatgagaagaaaccacct
agtggagaaggattaaatcgtaaagcacaagttactttagaccaagtatggccacacgat
aaatctctacataagcctattaccgatccgcatcgtttagctgcgatggattacgaagaa
aaattacgaagagtgtcagcgaaacatgatactagattcttagagtatcgacctgaaact
ggttcatgggtttttaaggtagatcatttttctaaatatggcctaagcgattcagatgaa
gaagataataatgtccctacagcgaatgacacgaaaagattaaaattgtgcgcaactcag
caaaaatgtgcaaccaagcaggagcaatcaaaagtagtttcaaataaagatacttccaag
gccaatgatttaaaaacagcgaatacagactattcagatttagatacacgtggacttctc
ttggaagcaattgtctcacgtcggtcgtttagaacagatcagaatcgtgaaaaacaacta
ccgataagtccaactggtgagaatgctcgcattttgggtacagacagtcataaactgcaa
ttaatgaaggccagcttctttgatggcagcgacgaagagattaacgaggcttatgatcaa
gaatcgaatcgcgcgttatttcttcccgatcgtagaagttctttgcgatgtttcaccaat
acgccacaaaaattagatgaagatcaaaactacgaaccaatttacagtccgatgttacga
tctaatttggcaattcatcggacgccaactattgcttatgaagaatcgaccctttcgaag
acagattccaaattggaacgctcgatggacatcgttgttaagacatcaacgatatatgaa
aaaggtttgccggatccttcgataactccggtgactacaattcttcgatgtatttctgaa
gtgattccgttatcaaaatctattatacataaactggaatctcgctctgttgctgatatt
ggcatacaaatgggaaggaggtttaaaccaagctggggacgtggtttaacattacttaca
ttgagtacgaagaaacaggctgacgatgtactattaaataattcttttgaacaaattgga
tcttacgtatgtggtcgttctccagaagatacaacatccgttgggatagtccaacgtata
caaattttgggtggtagtggaaccggcgaagaacgcattaagacattcaaagaaagtata
gaaggtcatctaaaaattcagctgtcacatcgtgtaatgaatccagatggagactgtcta
atttttgacgtagatacagatattaataaggcgagcatggctttacacgcacattgtagt
ttagccgaagaatttgcggaacagtttgccacagattcctttgcttcctatgttgctaac
gtttggaaactctgtgtagctctttggggaaatttacctgatgtaaacgttgccgcagaa
aattcagaagagcatagcgtcgtaattgcgcggcgagaggcaatcggggaatggttaaga
aacgttatacgaaaaactctcgtgttggaggatactgatattaattatgaaacaaagata
ttgcttttactatctgctttcgaattagaagaggcgtgtaaaattgcaagagaaatgggt
gatcattgtttggccttattgatggcgcagctgtgcagtggaatgccaataaaggtatta
acacagcagcaaattgcattatggcaaaatgccggtgttgatgaaaacctctcgttagat
cggctaaagctttttgcattggtggcgggtgaaccacctagtaaacattgtccaatcaat
gtgtgtgaaggtttcgattggaagagatcgttagctgttcatttgtggtatttttcatct
ccgactgcttctataagagacatattagacatttacgaggcctccttcgatacaaccaag
acaaatgacgtttatacgtcgataccgaaacccgaatacaaaggaaacgatttcgaactt
gaaataaataatgggaaaccaatatatgatctctgttttcatcttttgaagttattttgc
actggcaatcatacgttaggtgaattattgaatccagcaacacacactgctgatccaatg
gattacagactcagttggctgatgcagcaagtacttttagctttgggttattcacatctt
tcggaacatgttgccattttgacacatgttaattttgctacacaattagaagcatatgat
ctctggcattgggctatattcgtaatgttacatttaaaagatgccgcaaagaggaagact
gcggtaatgaatttattgcaacgacatgtcgaaatagacgatgctagcgattgtcctgat
tttatcgagcgagaaacgtttttacgggaagaattgggtataccttcgatttggattcac
catgcgaaagccgtgaaaagttacgtagctaaaagatacgggaaagcagctttctatttt
attcaagcagaacagtggaataaggcgcatgaaattattattgaacatttagcagcagat
gttataataaacgaaaattacgattacctgcgcagcttattgcgtccactgactccttta
gaatgcagtagcactataagtggttggacgtatcaaggacaattactctgggaatatatg
gaaataactatgaatgttgaatctttgctacgtagtgccgatccacgtggaataagttct
aaattggaatcactaaaacaacgattgtcaaatcttccttccaagatcaatcaatttcca
tgtttaactgcgaaacataggctttgtcaagcggaaattgcaaagagaacgatacactta
gctaggagtttgttacaactgaacgagaataaatctacgtcgatatatcaattggtatct
caattaccattgccggaagactatgcacaacaagagcttcgttttgtcattaatatgtgc
gtgaacgaaattatatattag
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