Bombus pyrosoma: 122572963
Help
Entry
122572963 CDS
T07776
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122572963
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122572963
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122572963
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122572963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Spt6_S1
S1_RRP5
Tex_central_region
OB_RRP5_4th
Tex_N
Tex_YqgF
m_DGTX_Dc1a_b_c
Motif
Other DBs
NCBI-GeneID:
122572963
NCBI-ProteinID:
XP_043594673
LinkDB
All DBs
Position
LG11:11532748..11540093
Genome browser
AA seq
1736 aa
AA seq
DB search
MADYLDIEAEESEEEQLDVKGKKKLKKLKAMEVSEDEDDDEEDEGEVPGLIDDSPIDDDN
DGEDSDGSEDSRKRKKSDDEDFDDRLEDEDYDLLEENLGVKVERKHRFKRLRKIQDEESE
VDEREMDDGRDAIANELFQGSGEEDEERSEVSHRGEAEGYDEEESEDEDDFIVDGDGIPI
TEKRRKKKLVFSDAALQEAQDIFGIDFDYDEFGKYVQDEFEEEEEDEYIHDEIEDRPRPS
KKYLKRKSTRKSIFEVYEPSELIRGHFTDVDNEIRTTDVPERMQLRAVPIIPTVEGSDEL
DLEAEWIYKQAFCQPTISIQDSHLNEEAKERAKKGPQTIGKIKKALDFMRNQNFEVPFIA
FYRKEYVLPELNINDLWKIYKFDVKWCQLKQRKENLLKLFEKMRNFQLDKIMKNPDAPLP
DDIRVIKDDDIERLKNAQTFEELNDIYRHFMLYYNQDMSSMQEIARKKEKEAQRKTKLEK
RKQRLTEAEENGEDQHEIPDAEDEEEEIDDSIKQPVRRGPYYICRKAGLDGFTKKFGLSP
EHFAENLRDNYQRHEVDQDPIEPAIVANDFCSAIFTTSDEILKAAQLMVAIQLAHEPLVR
KCVREMYMERAKVSVKPTKKGIKEIDEGHPIYGLKYLKNKPVRDLVGDQFLKLTIAEEDK
LITLSFSDMIEGNTSNNYIDEIKQLYYRDEFSKSVQDWNALRTGSVEVALNQIIIPQLKK
ELRSNLLLEAKECVMKACCRKMYNWIKIAPYTCEFPDENDEDWNTSKGIRVMGLAYVPDP
SQAAFTCIISPEGECTDYLRLPHILKHKNSFRESEKILKEADLLGIKNFIATKKPHVVVV
SGESREALMIVSDIKECIANLAEEEQFPTIQVEICDNELTKVYANSNRGISEFRDYPELL
RQAISLARKVQDPLLEFSQLCTIDEEILCLKYHPLQDQLPKDDLIENLYLEFINRINEVG
VDLNRAVQQPYTANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITACHMGPKVFVN
CAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPASALEEI
LESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRVPYQSLNTEKLFDI
LTKETPETFYVGKLVLATVVGISHRRPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELS
EVWNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDKHVANPEERVRVGQVIHCRIIKI
EVERFSVECTSKTSDLIDKNHEWRPQRDVYYEVEAEEKDTKTEEDAKKLQQRQTYVKRVI
IHPSFHNISFAEAEKLMLTVKQGEAIIRPSSKGSDHLTVTWKVTENIYQHIDVREEGKEN
TFSLGRTLWIGNEEFEDLDEIIARHINPMAAYASELLDFKYYKTSVEGIKDKAEEILKEQ
KKQNPGGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYVTIIPDGFRFRGQMFSRISDLFRW
FKEHFRDPIPGQATPGTPHGTMTSRTPYNGTPGVNGVNPDTIQRVAQNMPHHMLHSLSKV
ANQTPHHYPPYTPGAASVNNYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTPSHSQGP
FLQPIPPAMNSNSHRTARSHRSVSSTSDATNWTKAAEAWARSKQSSKEFNTTPRYDESRK
TPRNQEAQNGRTTPRNRTPSARTPSYKSPRETPFTNSSPRSMSLSGDGTPLYDESW
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggacattgaagcagaagaaagtgaggaggaacagcttgatgttaaa
ggaaagaaaaaacttaaaaaattaaaagcgatggaggtcagtgaggatgaagatgatgat
gaagaagatgaaggagaagttccaggacttattgatgatagtcctatcgatgatgataat
gatggtgaagatagtgatggatctgaggattccagaaaacgtaagaaaagtgatgatgaa
gattttgatgatcgtttagaagatgaagattatgacctacttgaagaaaatttaggagtt
aaagttgaaaggaaacatcggtttaagcgtttacgtaaaatacaagatgaagagtcagaa
gtggatgaaagagagatggatgatggaagagatgctattgccaacgaattgtttcaaggt
tctggagaagaggatgaagaaagaagtgaagttagccatagaggtgaagcggaaggatat
gatgaggaagaaagtgaggatgaagatgattttattgtagatggtgatggaatacccata
accgaaaaaaggagaaagaaaaaacttgtattttcagatgctgcattgcaagaagcccaa
gatatttttggcatcgattttgattatgacgaatttggaaaatatgtacaagatgagttt
gaggaggaagaggaggatgaatatattcatgacgagatagaagaccgcccaaggccatca
aaaaaatatcttaagagaaaaagcacaaggaaaagtatttttgaagtatatgaacctagt
gaacttatacgcggacacttcaccgatgtggacaatgagattcgtactacagacgttcct
gaacgtatgcaacttcgcgctgttcccattatacctacagtggaaggttcggatgaatta
gatcttgaagccgaatggatatataaacaggcattctgccaaccaacaatttcaatacaa
gattctcatctaaatgaagaagccaaagaaagagctaaaaagggtccgcaaacaatcggc
aaaattaagaaagccttagattttatgcgtaatcagaacttcgaagttccgtttattgca
ttttatagaaaagaatacgtgttgccagagttaaacatcaatgatttgtggaaaatttat
aagtttgacgtaaaatggtgccaacttaaacaaagaaaagaaaatttattgaaactcttt
gagaagatgaggaattttcaattagataagattatgaaaaatcctgatgctccattaccc
gacgatatacgagttattaaagacgatgatattgaacgacttaaaaatgctcagactttt
gaagaattaaatgatatttatcgacattttatgttgtattataatcaggatatgtcatcc
atgcaagaaattgcacgtaagaaggaaaaagaagcacaaaggaaaactaaattggagaaa
agaaagcaacggcttacagaagctgaagaaaatggagaagatcaacatgaaattcctgat
gcagaggatgaagaagaagaaatagacgactcaataaagcagccagttagaagaggtcct
tactatatttgcagaaaggctggcttagatggatttactaaaaaatttggtctctcaccc
gaacattttgctgaaaatcttcgggacaattatcaacgtcatgaagtagatcaagatcca
atagaacctgcaatagtagcaaatgatttttgttctgcaatatttacgacaagtgacgaa
atacttaaagctgcacaattaatggttgcgattcagttggcgcacgaacccttagttcgt
aaatgtgttagagaaatgtatatggagagagcaaaagtatctgtaaaaccaactaaaaaa
ggaataaaggagatagatgaagggcatcccatttatggattaaaatatcttaaaaataag
cctgtacgcgatcttgttggtgatcaattcttaaaactaactatagcagaagaagataaa
ttaattacactttcctttagtgacatgatagaaggaaatactagcaataattatatcgat
gaaataaagcaactatattatagggacgaatttagtaaaagtgtccaagattggaatgca
ttaagaactggtagtgttgaagtagctttaaatcagattattatacctcaattgaaaaaa
gaattgagatccaaccttttattagaagcgaaagaatgcgttatgaaagcgtgttgccgc
aaaatgtacaattggataaaaattgctccatatacttgtgaatttcctgatgaaaatgac
gaagattggaatactagcaaaggaattcgtgtgatgggtttagcatatgtgcctgatccg
tctcaagccgcctttacttgcataatttctccagaaggagaatgtactgattacctaaga
ttaccacatatattgaaacataaaaatagttttagggaaagtgaaaagatattgaaagag
gcggacttactaggaattaaaaattttattgccacaaagaaaccacatgttgtggtagta
agtggtgaatctagagaagcattaatgatagtatctgatataaaagaatgcatagctaat
cttgcagaagaagaacaatttcctacaatccaagtggaaatatgtgataatgaacttact
aaagtttatgcaaatagtaatagaggtatatctgagttcagagattatccagaattatta
aggcaagctatatctttagcaagaaaagtacaagatcctctattggaattctctcagttg
tgtactatagatgaagaaattctgtgccttaagtatcatcctttgcaagatcaacttcct
aaagatgatcttatagaaaacttatatttggaatttataaatcgtataaatgaagtagga
gtagatttaaatagagccgttcagcagccttatacagcaaacctagtacaatttgtgtgt
ggcttaggacctagaaaaggacaggctctgattaagattttgaaacaaactaatcagaga
ttagaaaatagaacacagcttataacagcatgtcatatgggacctaaagtgtttgtcaat
tgtgctggttttattaaaattgatacaaacagtttaggagatagcacagaggcatatgta
gaagtactagatggctcgcgtgtacatccagagacatatgaatgggcaagaaaaatggca
gtagatgctttagagtatgatgatgaagatgcaaatcctgctagtgccctagaagaaatt
cttgaatcaccagaaagattaaaagatttagatttagatgcatttgcagaggaacttgaa
agacagggttttggaaacaagtgcattactctttacgatataagagctgaactaaactgt
agatacaaagacctccgtgtaccttaccaatctctaaatactgaaaaattatttgatatt
ttgactaaagaaactccggaaactttctatgtcggtaaattagttttagcaacagttgtt
ggtataagtcatagaagacctcaaggagatcaattagatcaagcgaatcctgttcgaaat
gatgaaaccggattatggcaatgcccattctgcttgaaaaacgattttccagaattgtcc
gaggtatggaatcattttgatgccggtgcatgtccggggaaagcaactggaattcgttta
agattggataatggaatatctggatatattcacgtaaaaaatctgtctgataaacatgtc
gctaatccagaggaaagagtacgtgtcggacaagtaattcattgtcgcataattaagatc
gaagtagaacgatttagtgtcgaatgtactagcaagacgagcgatcttattgataaaaat
cacgagtggagacctcaacgagacgtttattatgaagtagaggcagaagaaaaagatacg
aaaacagaggaagatgctaagaaattgcaacaacgacaaacttatgtaaaacgtgttata
attcatcctagcttccataatataagttttgcagaagctgaaaagttaatgctaactgtg
aaacaaggagaagcaataatacgacctagcagtaagggatccgatcatttgaccgtaaca
tggaaagtcacagagaatatttatcaacatattgatgtaagggaagaaggcaaagaaaat
acattctctttgggtcgcactttatggattggcaatgaagaattcgaagatttggatgaa
attattgctagacatattaatccgatggctgcttatgcttcggaacttttagattttaaa
tattataaaacaagtgtagaaggcattaaagataaagcagaagaaattttgaaggaacag
aagaagcaaaatcctggagggataccatatattgtgtctgcagctaaaaattatcctgga
aaatttttactttcgtatttaccacgaactcgttgccgtcatgaatatgttactataata
cctgatggatttcgatttagaggtcaaatgtttagtagaataagcgacttgttccgctgg
ttcaaagaacattttagagatcctataccaggacaagctacacctggtactccacatgga
actatgacttccagaacaccatacaatggtactccaggagtgaatggagtgaatccagat
acaatacagagggtagcacagaatatgccacaccacatgttacattcactctcgaaagta
gcaaatcaaactccacatcattatccaccatacaccccaggagctgctagtgttaataac
tatggaatgtatggaagtacgccttatacaccttccggccaaactccgtttatgaccccc
taccatacaccgcaccacacgcctcatcatccacaaacacccagtcactctcaaggacca
ttcttacaaccaattcctccagcaatgaattcaaattcacatagaactgcgagatcacat
agatctgtctctagtacttctgatgcaacgaattggacaaaagcggcggaagcatgggct
cgatcaaagcaatcttcgaaagaatttaatactactccaagatacgatgaatctagaaaa
acgccacgaaatcaagaagctcaaaatgggagaacaactccgcgcaatagaaccccatct
gctcgtactccgtcttataaatctcctagagaaactccatttacaaattctagtccccgg
agtatgtctctaagtggagatggtactcccctatatgatgaaagttggtaa
DBGET
integrated database retrieval system
