Bombus pyrosoma: 122573015
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Entry
122573015 CDS
T07776
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122573015
03009 Ribosome biogenesis [BR:
bpyo03009
]
122573015
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122573015
Spliceosome [BR:
bpyo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122573015
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
90S particles
Helicases
122573015
Pre-60S particles
122573015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
IL1
Motif
Other DBs
NCBI-GeneID:
122573015
NCBI-ProteinID:
XP_043594783
LinkDB
All DBs
Position
LG11:complement(14373346..14379915)
Genome browser
AA seq
582 aa
AA seq
DB search
MSVPNKVLMRKIKKKERKKLEVLKEREKQVQDYKCEAPIENLEDDIQENEVDVMNESKRR
HSQESVPVKKKRKKIEDDQISQDNNTNSINENLPGSAMGLTIANDTNFKVLAESVCENTL
KAIEDMGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYKLKFMPRNG
TGCIIISPTRELSMQTFGVLKELMKYHYHTYGLLMGGANRQTEAQKLVKGINIIVATPGR
LLDHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKRLTMLFSATQTKQT
EMLTTLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVF
FSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNASSGILLCTDVAARGLDI
PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQARVPVNEF
DFSWNKIADIQLQLEKLVSKNYFLNMSAKEAFKAYVRAYDSHHLKQIFDIETLDLSKVAK
SFGFVVPPAVDLKVGVSKNSRPRKRLGGGGYGYSKFKSRSNF
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtacctaataaagttttaatgcgaaaaattaagaaaaaagaaaggaagaaactt
gaagtattgaaagaacgggagaagcaagtgcaagattataaatgtgaagccccaattgaa
aatttagaagatgatattcaagaaaatgaggtagatgttatgaatgaatcgaaacgacgt
cactcacaagaaagtgtgccagtaaaaaagaaaagaaagaaaatcgaagatgatcaaata
tcacaagataacaatactaatagtataaatgaaaatttacctggatctgcaatgggtcta
acgatagcaaatgatacgaattttaaggtattagcagaatctgtttgtgaaaacacttta
aaagcaatagaagacatgggttttacaaacatgacagaaatacaagcaaaagctattcct
cctttactagaaggaagagatctagtgggttctgcaaaaacaggatctgggaaaacttta
gcatttttaataccagctgttgaattaatttataaattgaaatttatgcctcgcaatggc
acaggttgtattattatatctccaacacgagagttatctatgcaaacatttggagtttta
aaagaactaatgaaatatcattaccatacatatggtttactaatggggggtgctaataga
caaactgaagctcaaaaacttgtaaaaggaattaatattatcgtagctacccctggtaga
ttattggatcatctacaaaatacagcagactttttgtataaaaatcttcaatgtctggtt
attgacgaagctgatcgtatcttagatattggttttgaagaagaactgaaacaaattatt
aacattttaccaaaaaagagattaacaatgttgtttagtgcaacacaaaccaagcaaacg
gaaatgttaacaactttagctctaaaaaaagaaccagtttatgtcggtgttgatgatgat
aaggaaaaggcaacagtagaaggtttagaacagggttatgttgtgtgccccagtgaaaag
agatttttacttttatttacttttttaaaaaagaacagaaagaaaaaggttatggttttc
ttcagttcatgtatgtcagtcaaatatcatcatgaactactaaattacattgatttgcca
gtattaagcatacatgggaaacagaaacaaacgaagagaacaacaacatttttccaattc
tgtaacgcgtcttctggtatactcctttgtactgatgtggccgcccgtggtcttgatata
ccagctgttgattggattgtacaatatgatcctccagatgatcctaaggaatatattcac
cgtgttggtagaacagctcgaggagaaggtagcagcggtcatgcgttactaattttaagg
ccagaggaacttggttttctccgttatcttaaacaggctagagtacctgtaaacgaattt
gatttttcatggaataaaattgctgatattcaattacagcttgaaaaattggtttcgaag
aattattttttaaatatgtcagcaaaagaagccttcaaagcatatgtgagggcatatgat
tctcatcatttgaaacaaatttttgatattgaaaccctggacttatcaaaggtcgcaaaa
tcttttgggtttgtggttccaccagctgtggatttgaaagtgggagtaagtaaaaattcc
cgaccacgaaaaagattaggtggaggcggttatggatactctaaatttaaatcacggtct
aacttttaa
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