Bombus pyrosoma: 122573020
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Entry
122573020 CDS
T07776
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122573020
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122573020
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122573020
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122573020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
Tex_YqgF
HHH_3
HHH_9
Spt6_S1
HTH_10
S1_RRP5
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
122573020
NCBI-ProteinID:
XP_043594803
LinkDB
All DBs
Position
LG11:2270237..2276942
Genome browser
AA seq
1773 aa
AA seq
DB search
MADFLHSEAEESEEEKELDDNEKKKLKKIKAMEESDEEEEEDDEDRLREELKDLIDDNPI
EESEGDDSDASGVSQKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEADDDRDAIANELFEGSGDEREIAMEDERRSERSHRPEVDTFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEE
EEEEEDEYMDDEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIP
ERMQLRTVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIG
KIKKALDFMRNQQFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLF
DKMRNYQLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQTSEELNDVYHHFMLYYSHEIPA
MQEAARQKEKEARKEAKIQKRKQQIADAEENGEDPLPEEEPDVEEEEEADETLKQAVRTG
PYSICRRAGLDNLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLTIANEYCSQILNSSE
EVLKAAQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPVYGMKYLKD
KPVRDLVGDQFLNLVIAEEDKLITITLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWN
ALRVGSVEMALTRIVLPSLKKELKANLIAEAKECVMRACGRKMYNWIKVAPYTCEFPEEE
DEEWDTSKGLRVMGLAYVPEYSQAAFTCLIAPDGECTDYLRLPHIMKRKNSYREDEKAMK
EADLLAIRNFIATKKPHVVAIGGESREAMMIAADIKECIANLVEEEQFPNIKIEICDNEL
AKIYSNSNKGVSEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHNLQDQL
PKDELLDNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQ
RLENRTQLVTSCHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKM
AVDALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELN
CRYKDLRVPYQSLSAERLFDILTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVR
NDETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRH
VANPEERVSIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTEAEQKD
AKVEEDAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTV
TWKVTDEIYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDF
KYYKPAVEGIKDKAEEILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTV
SPEGFRFRGQMFGRVSDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMN
QEAIQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTANAAGYGGVHTYPNTPYTPSGQT
PFMTPYQTPHHTPHHHGQPTPRYGQQTPNHQQGPFIHPPPPSGINSTGHHRSTPSHRPTP
PMSTPGDPMDWKKAAEAWARLKSGPRVSTSTPRYEESRRTPRNYEESVGRTTPRNRTSNR
TPSYKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttttacattcagaagcggaagaaagcgaggaggagaaggaattagacgat
aatgaaaaaaagaaactgaagaaaataaaagctatggaagaaagtgatgaagaagaggag
gaagatgatgaggatcgtttacgggaagaacttaaggatctcattgacgacaaccctata
gaagaaagcgagggagacgatagtgatgcttctggagtgtctcaaaaacgtaaaaaaagt
gatgatgaggactttgatgatcgtttagaagatgaagattatgatttgatagaagaaaat
ttaggagtcaaagttgaaagaaaacgtttcaaacgcctccgaaggatacaagatgaggaa
tcagaggaggaacaggaaaaggaggcagacgatgatagagatgctattgcaaacgaactt
tttgaaggttccggcgatgaaagggagattgctatggaagatgaaaggcgaagcgaacgt
agtcacagacctgaagtcgacacatttgacgaggaaggaagtgaaggagaatacaccgac
gctgatgattttattgttgacgatgacggtagaccaatcgccgagaaacgcaaaaagaaa
aagccaatcttttctgatgcagctttgcaagaagcacaagacatttttggtgttgatttt
gattatgatgaatttggtaaatacggcgaagaggactatgaggaggaagaagaggaagaa
gaggaagaagaagaagatgaatacatggacgatgaagacgccgagagaccgcgaaggccg
aaaaaacagttgaaaaagaaaactacgagaaaaagtattttcgaaatttacgaaccaagc
gaacttaaacgcggtcattttaccgatatggataatgaaatacggaacacagatataccg
gagagaatgcaactccgtactgttcctgttacgccagttgcagagggttctgatgaacta
gacttagaggcggagtggatctataaacaggcgttctgtcgaccaactatttcaattcaa
gatgcacacctaaacgctgaggctaaagaaagagctcggaaagggcctcaaacgatcggt
aaaattaaaaaagctttagacttcatgcgaaatcagcaattcgaagtacctttcatatcg
ttttatagaaaggaatatgtcctaccggaactaaacattaacgatctctggaaagtgtac
aaatttgacgccaagtggtgtcaacttcgtcagagaaaagaaaatttattaaaattattt
gacaaaatgcgaaattatcagttagatgagattatgaaaaatcctgatgctccattacca
gataacgtacgattgattaaagatgatgacatagaacgattgaaaaatgtgcaaaccagc
gaggaactaaatgacgtttatcaccacttcatgttatactatagtcatgagataccagca
atgcaggaagctgctcgtcagaaggagaaagaagcacggaaagaagcaaagattcaaaaa
cgaaaacaacaaattgcggatgccgaggaaaacggagaagatcctctgccggaagaggag
ccggacgtagaggaagaagaggaagcagatgaaacattgaaacaggctgttcgaactggt
ccatattctatttgcaggcgggccggcctcgataacctcgcaaaaaagttcggtctcact
cccgaacatttcgccgaaaatttacgagacaattatcagcgacacgaagtagatcaggaa
ccaacggaacctttaaccattgctaatgaatactgtagtcaaatacttaatagttcggaa
gaagtactaaaagctgctcaattaatggtagctattcaattagcgcgtgaacctttggta
aggaagtgtgtccgagaaatgtacatggaaagagcaaagatatctgtaaaacctacgaaa
aaaggaatcaaagagatcgatgaaaaccatccagtttacgggatgaagtatttgaaggat
aaaccagtgcgagatctggttggagatcagttcctaaatttggttatagccgaagaagat
aaattaattacgataacattgagtgatagcatcgaagggaatactagtaacaactatgtt
gacgaaatgaaacaactttattatcgagacgagtttagtaaaaatgtccaggattggaac
gcattgagagttgggagtgttgaaatggcacttacacgtattgttttaccgagtctaaag
aaagagctaaaagcaaatcttattgcagaagctaaagaatgcgtaatgagagcatgtggt
cgtaaaatgtacaattggattaaagttgctccttatacctgtgaatttccagaggaagaa
gatgaggaatgggataccagtaaaggacttcgggtaatgggtttagcttatgtcccagaa
tactctcaagccgcattcacttgtctaatcgcaccggatggggaatgtacagattatttg
agattgccacacataatgaaacgaaagaatagttaccgagaggacgagaaagctatgaaa
gaagccgatttgttagcaattcgaaattttatagcaacaaaaaagccgcatgttgtagct
ataggtggtgagtcgagagaggcaatgatgatcgcggctgatattaaagaatgtattgcg
aacctagtagaagaagaacaattcccaaacattaagatagaaatttgtgacaatgaattg
gctaaaatttactcgaacagtaataaaggtgtatctgaatttcgggattatccggaatta
ttgcgacaggctatctcattgggcaggagaatgcaggatcccttggtggaattttctcaa
ttatgcaccgctgacgaagaaattttatgtttaaagtatcacaacttgcaagatcaattg
ccgaaagacgaacttttggataatttatatttagaattcgtgaatcgcgtaaacgaagtt
ggcgttgatgtgaataaggcggtacaacaagcttattgcgggaatttagttcaatttgtg
tgtggtttggggccgagaaaaggacaggcattgatcaaaatgttgaaacaaaccaatcaa
aggttggaaaatagaactcagcttgtaacttcttgtcacatgggacctaaggtttttatt
aactgtgcgggttttattaagatagatacaaacagtttaggagacagcaccgaagcgtat
gtcgaagtccttgatgggtctcgagtacatcccgaaacgtatgaatgggcgagaaaaatg
gcagtcgacgctttagaatacgacgacgaagatgctaatccagccggagcactggaagag
attctcgaatctcctgaaagactaaaagatcttgatttggacgcgttcgcggaagaactt
gaaagacaaggtttcggcaataaatgtgtcactttatacgatatcagagcagaattaaat
tgcagatataaagatttacgtgtaccatatcagtcactgagcgcggaaaggttgttcgat
attctaacgaaggaaaccccggaaacattttacgtagggaaattagttttggccacagta
ataggaataagccatagaaaaccgcaaggtgatcagttggatcaagccaatcccgtaaga
aacgacgaaactggattgtggcaatgtccattctgtttgaaaaatgattttccggaatta
tccgaagtatggaatcattttgacgccggagcttgccccggcaaagctactggcgtgaga
ttaagattagataatggaatatctggttatattcatataaaaaatttatctgacagacac
gttgcgaatcctgaagagagagtaagcataggacaaataatacattgccggataataaag
attgaagtggagcgattcagcgtcgaatgtacaagtaaaagtagcgacctcgcggataaa
aatcacgaatggagaccacaaagagatccgttttatgacacagaagcagaacaaaaagat
gcgaaagtcgaagaagatgccaagaaagcgaagcaacggcagacatatgtgaaacgcgta
atcgtacatccttcttttcacaacatcagttttgcagaagctgaaaagttaatgcaaact
atgaagcaaggggaagcaatagttagaccgagcagtaaaggtgctgatcatttaactgtc
acatggaaagttactgatgagatttatcagcatatcgatgttagagaggagggaaaagaa
aatgccttttctctcggtcaaagcttatggattggaaacgaagaattcgaggacttggat
gaaattattgcgagacatgttaatcctatggctgcatatgcttcggaattattggacttt
aaatattataaaccagctgtagaaggcattaaggataaagcggaagagatattaaaggaa
caaaagaaggaaaatcctggaggaattccgtatataatatctgctgcaaagaattatcct
ggaaagtttttgctatcttatcttccgcgaactcgatgtcgtcacgaatatgtaacagtg
tcaccagaaggatttaggttcagagggcaaatgtttggtagagtgagcgacttgttccga
tggttcaaagaacatttccgtgatccggtacctggacaatctactcctagtactccacgt
ggagcaatgacatctagaacaccttatcatacaacgccaggagcagtgagtggaatgaat
caagaagccatacaaagagtggcgcagaatcttccgcatcatatgttacattctttatcg
caagtggcgaatcagactcctcatcattatccaccacacacaccaggaactgcgaatgca
gctggttatggtggagttcatacttatcctaatactccgtacacaccttcgggacaaaca
ccttttatgacaccatatcaaacaccacatcatactccacatcatcatggtcaaccaact
ccaagatatgggcaacaaacacccaatcatcagcaaggtcctttcattcatccacctcca
ccttcagggataaattctacaggacatcacagatcaacaccatcgcatagacctacgcct
ccaatgtcaacaccaggcgatcctatggattggaaaaaagcagcggaagcatgggcacgg
ttaaaaagtggaccacgtgtgtctacctctactccaagatatgaagaatctagaagaact
ccacgaaattacgaagaatcggttggaagaacaacgccacgaaatagaacttcgaatcgg
acaccttcttataaatctcctcgaggtacaccacacactaattcaagtcctcgaagtatg
tctcttagtggagatggtactcctttatatgatgaaagttaa
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integrated database retrieval system
