Bombus pyrosoma: 122573113
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Entry
122573113 CDS
T07776
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122573113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122573113
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122573113
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122573113
Coactivators
SAGA/TFTC/STAGA complex
122573113
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122573113
STAGA complex
122573113
TFTC complex
122573113
SAGA complex
122573113
SLIK complex
122573113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_like
PEP5_VPS11_N
RMC1_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_NWD2_C
VPS8_N
Motif
Other DBs
NCBI-GeneID:
122573113
NCBI-ProteinID:
XP_043595011
LinkDB
All DBs
Position
LG11:complement(2594567..2597771)
Genome browser
AA seq
652 aa
AA seq
DB search
MDNDKSTMLAVLQLLRKYNLKGTEELFKKEANLIDISPDEAQQTDSEVNSVLSAYKSEGD
PALYEKAYSELKKFVEGSLDIYKHELGTILYPVLVHMYLELVYNNHSEEAKKLLERFGGN
LEEYYQNDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHCVLL
NIIQEHLYFDMYEGVARNKQQIDATSGAMVGEATRQDNKAKVYYGLLKEPDIQCMPPTEE
EEDDTGGIDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKGKALREA
SKRVVLGPDTLPSICFYTLLNTVHSVTAAEVAEDSSLLAIGFGDSSIKVWSLVPQKLRLM
KTGEQLQDIDREADDVLVRMMDDRTAETSRSLFGHNGPVYSLSFSPDRNLLLSSSEDSTV
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFATSSHDKTARLWATDSHQPLRIFAGHY
SDIDVVQFHPNSNYVATGSSDMTVRLWDCVNGAQVRLMTGHKAPIYSLAFSAEGRFLASA
GADHRVLVWDLAHGHLVAALSSHSGTIHCLSFSRDGNILVSGSLDCTIKLWDFTKLAEEM
SLEDVNVSHNPDVKTNTESYLLRTFATKNTPVLALHFSRRNLLLSVGMFEST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgataaaagtactatgctggcagttctgcagctacttagaaaatataattta
aagggaacagaggaattatttaaaaaggaagcaaatctgatagacatttctccagatgaa
gctcaacaaactgattctgaggtgaacagtgttctttctgcttacaaaagcgagggagat
cctgcgttatatgagaaagcatatagtgaactaaaaaaatttgtagaaggatctttagat
atatataagcacgaattaggcacaattctatatccagttttggtacatatgtacctcgaa
ttggtttacaataatcattctgaagaagcaaagaaattactggaaagatttggtggaaat
ttggaagaatattatcaaaatgacttgaaaagattgtccaatgtcacaaaacgtgaacaa
atggctggaaatgaattaaccgacactttcaaatctaatcagttcataatcagaatgtcg
agggatacactctctatattaaaaagacatttgcaagagaagaagcactgcgtgttgtta
aatattatacaagaacatctttattttgatatgtatgaaggagtagctaggaataagcag
caaattgatgccacatcaggtgcaatggttggtgaagcaacaagacaagataataaggcg
aaagtatattatggacttttgaaggagccagacattcaatgcatgcctccaaccgaagaa
gaagaggatgatacaggtggtatagatggagataaaccaaaaaagaagaaagctaaaaag
gatccattattttctaagaaaactaaatcagatccaaatgcacctcctgttggtagaatg
cctttgcccaatttgaaagatgcggataagttggaaaaaggaaaagcattgagggaagca
tcgaaacgcgttgtacttggtcctgatactttgccatctatatgcttttacacgctattg
aatacagtacatagtgttacagcagctgaagtagcagaagattcgagtttgctggccatc
ggatttggtgactctagtataaaggtctggagtctggttccacaaaaattaagactgatg
aagacaggggaacaattacaggacatagatagagaagcagacgacgtactagtaagaatg
atggacgatcgtacagcagaaacatcgagatcgttattcgggcacaacggtcctgtatac
agtctatcatttagtccagacagaaatctccttctttcgtcatcagaagacagtacagtg
aggctgtggtctctgcatacatggacgtgtgtagtatgctacaaaggacacttattccca
gtatggtgtgtaagattttcgcctcatggttattatttcgcaacttcttctcacgacaaa
accgccagactctgggcaactgattctcatcaaccacttcgaatatttgccggtcactac
tcagacatagatgtagtacagttccatccaaattcaaactacgtagcaaccggttctagc
gacatgacagtaagattgtgggactgcgtaaacggcgcccaagtcaggttaatgacagga
cacaaagctccgatttactcccttgctttttctgcagaagggcgatttctggcatcagcc
ggtgctgatcaccgtgttttagtttgggatttagcacatggtcatcttgtcgctgcctta
tcgagtcattctggcactattcattgcctatcattcagtagagatgggaatatactagtt
tcaggatcgttagattgtacgatcaagttgtgggattttacgaaacttgctgaagaaatg
agtttggaagatgtgaatgtttcacataatccggatgtaaaaacgaatacggaatcatat
ctccttcgaacgttcgcgacaaaaaacacacctgtgctagcgctacatttctcgcgaaga
aatttactcttaagcgtcggaatgttcgagtcaacttag
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integrated database retrieval system
