KEGG   Bombus pyrosoma: 122573489
Entry
122573489         CDS       T07776                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122573489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpyo03019]
    122573489
Messenger RNA biogenesis [BR:bpyo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     122573489
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 122573489
NCBI-ProteinID: XP_043595836
LinkDB
Position
LG12:complement(11943143..11946968)
AA seq 870 aa
MDTTEDCSGKCQAVEIENQQVNQLIPGYENFHDFVQEAFDAIKLGIKCANSLPTGSNFNY
YSCFPSFLKAKDENTKLSMDVMQHLLGLAGIKGNMSNLDIEEKFDLLLETNDMLLDRANA
LMDKECGIAKNTEVELLVSSAKGQPDGVNGSWNKHVYRSQATENVQSVRLLAGKNIQRPQ
LMFKDKIDNSSKPWCPRIKDKPNSLKPLAIYLEEGENGEVFSHPYEYELDMFVPPNDQLK
KSVPRKYKSLEETLLVMIKDPSDIQLLVEDLKRYKEIAIDLEHHSYRSFQGITCLMQIST
GDTDYLIDTLSLRSELHELNEIFTKSTILKVFHGADLDIQWLQRDLSLYVVNMFDTHQAA
KQLNLPYLSLAYLLKHYCNVDPDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKDLLRN
ALIDVANGQINILKAVYDRSTEICKKTYIKPVWTEESCMIMYRKSQKMFNNKQLYALKEL
HKWRDQTARGEDDSIAYVLPNHMLLNIAETLPREMQGILACCDSIPPLVRQNLLKLHKII
LKAREQPLIKPIIEDDIRQRLTQRNPVNDSKMWMYSPHDIPSDMEARADLPCLLDENNII
EEQISHIAMKHAVTVFDSPTTSENEEAEMDEQESNRKKRFLFVSPFERYKRVIPMIAEQE
AQERERLRQEEENRLNELKKKEDEMAESKNRVYEHFKSVSQMVTEGSVSNLPKKPSQIPL
SQMSGRKRKRDSNINKEDEVQDKKVKDDLSNPTPMLETKTTQHVKQESDEIERFSEEQNV
PESITKSQKQASSNETINSLRSRKKGEKDYIIKELRKKGMMPSKTFDYKVVDFSTFQGGS
TNVSNQVNFEQTMKRKKEKKRKRKKQKLNI
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggatactacggaagattgcagtggcaaatgccaagcggtggaaattgagaatcaacaa
gttaaccaattaatacctggatatgagaattttcacgattttgttcaggaagcattcgat
gccataaaacttggaattaaatgtgctaatagtctaccaactggatcaaatttcaattat
tactcgtgttttcccagtttcctcaaagccaaagatgaaaatacaaaattgtcgatggac
gttatgcagcatttattggggttagctggcataaagggcaatatgtcgaatcttgatatc
gaagagaagtttgatcttttattagaaacgaacgacatgcttttggaccgagccaatgcc
ttaatggacaaagaatgtggcatcgctaagaataccgaagtagaattgctggtgtcgagc
gcaaagggtcaaccagatggagttaacggttcatggaacaaacatgtttatcgatcccaa
gccacggagaatgttcaatctgttcgtttattagctggtaaaaatattcaaaggccgcag
ctaatgttcaaagacaaaatcgacaatagctctaaaccttggtgtcctagaattaaagac
aagcccaattctttgaaacctttggctatttatttggaagaaggtgaaaatggtgaagtc
tttagtcatccttatgaatacgagctggatatgtttgtcccccctaatgatcagttgaaa
aaatcggtaccgagaaagtataaatccctggaagaaactctattggtaatgatcaaagat
ccgtcggatattcagctattggtagaagatctaaaaaggtataaagaaattgctatagac
ttggaacatcattcgtatagaagctttcaaggaatcacctgtttgatgcagatctcaaca
ggagatacagattacctgatagatactctgtcgttgcgatctgaattacacgagttgaat
gaaatttttactaagtctacgatactaaaagtttttcatggagcagatttagacattcag
tggcttcagagagacctatctctgtacgtagtaaacatgtttgatacgcatcaagcggca
aaacaacttaacctgccgtacttaagtttagcatatttactaaaacattactgtaatgta
gatcctgataaacattttcaaatggcagattggcgcataagacctttaccagagaaactt
ataaaatatgccagggaggatacgcattatttattgtacataaaggatttattaaggaat
gctttgatagacgttgctaatggacaaatcaatattttgaaagctgtatacgacagaagt
acagagatttgtaaaaagacttatataaaaccagtttggacagaggaaagttgcatgatt
atgtatagaaagagccagaaaatgtttaataataaacagctttatgctctaaaagaattg
cataaatggagagatcaaactgccagaggggaagatgatagtatcgcttatgtattgcca
aatcatatgttattgaacatagctgaaacattgcctcgtgaaatgcaaggaattttggca
tgctgcgactctattcctcctttggttagacagaatttattaaagctacataaaataata
ttaaaggctagggaacagccgcttattaagccaatcattgaagatgatatcaggcaaaga
ttgacgcaaagaaatcctgttaacgattcaaaaatgtggatgtattcacctcatgatatt
cccagtgatatggaagcacgagctgacttaccatgtttgttggatgaaaacaacataata
gaagagcaaatttcgcatattgcgatgaagcatgcagtgactgtgtttgacagcccaact
acgtctgagaatgaggaagcagaaatggacgagcaggaaagtaatagaaaaaaaaggttt
ctcttcgtaagtccgtttgaacgatacaaacgggttatacctatgatagcggaacaagaa
gcacaggaaagagaaaggctaagacaagaagaagaaaatcgtttgaatgaactaaaaaag
aaagaagatgaaatggcagagagtaaaaacagagtttacgaacattttaaaagtgtttct
caaatggtgacagaaggaagtgtgtcaaatttaccaaaaaaaccatctcaaattccactg
agtcaaatgtcgggccgtaaaagaaaacgagattcaaatattaacaaagaagatgaagta
caagacaaaaaagtcaaagatgatttatcaaacccaactccgatgttagaaaccaaaact
actcaacatgtaaaacaagaatcagatgaaattgaacgttttagtgaagagcagaatgta
ccagaaagtattacaaaaagtcagaaacaagcatcgagtaatgaaactattaattcgtta
cgctcaagaaaaaaaggagaaaaagactatataattaaggagttgagaaagaaaggtatg
atgccgtcaaaaacattcgactataaagtcgtagattttagtacttttcaaggaggtagt
acaaacgtatccaaccaagtaaactttgaacaaacgatgaagaggaaaaaagaaaaaaag
cgaaaaaggaagaagcaaaaattgaatatataa

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