Bombus pyrosoma: 122573564
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Entry
122573564 CDS
T07776
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122573564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122573564
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122573564
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
122573564
NCBI-ProteinID:
XP_043596032
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Position
LG12:6180992..6190117
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AA seq
774 aa
AA seq
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MTDDKTEFDWGNEKLQRAQKTVDESSYDLEAWSILIREAQNRPIIEVRPVFEKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINM
EQLWKDYMAFEQNINPIIADKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVGRSTVGALPRIPDPEEAIASLPRPDISQMIPYKPKVNPLPGEHPVPGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPVADNGCDTKLFDLA
KSVHWIVDESNDGVSIGSKRRRTRLGDDSEEEDLPPPPANDIYRQRQQKRVKKEKCSLRI
SGSDRTSWLCGTLLPMVLTFQVTTQVTSSRFSLFLRRIFLFRSVLLARGETIET
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgataaaacagaatttgattggggaaatgaaaaattacaacgtgctcaaaaa
acggtagatgaatcttcatatgatttggaagcatggagcatccttatcagagaagcacaa
aacagacctattatagaagtaaggccagtttttgaaaaacttgtctctgtgtttccttct
gcaggaagatattggaaaatttacattgagcaagagatgaaaatgcgcaactttgaaaag
gtggaaaagcttttccaaagatgccttatgaaaatcttaaatattgagttgtggaaactt
tacctttcttacgtgaaagaaacaaaagccagtcttgcaacatacaaggaaaaaatggcg
caagcatatgactttgcgctggataaaattggtatggatatccattcctatagtatatgg
aatgattacgttacattccttaaaagtgtagaagctgttggttcatatgctgagaaccag
aaaattagtgctgtgaggaaggtgtatcaaagaggtgtagttaatcctatgataaatatg
gaacaattatggaaagattatatggcttttgaacaaaatattaatccaataattgcggat
aaaatggctattgagcgttctagagattatatgaatgcaagacgagttgccaaagaatta
gaagcggtaacaagaggattgaatcgaagtgctcctagtgtacctccaactggtcatcca
gaagaagttaaacaggttgaattgtggaagaaatatattgcatgggaacgtagtaaccct
ttaagaaccgaagatacttctttagttgctcgcagagtaatgtttgctatagaacagtgt
ttattatgtttgggtcatcatcctgcagtgtggcatcaagctgcacattttctagagctt
agctcaaaaatattaacagagaaaggagatgtaaatgctgcaaagaatttaagcgatgaa
gcagcaacaatgtttgaaagagcaacaagtacattgttgtccaagaatatgttattatac
tttgcgcatgccgattttgaagaaggaagagtaaagtatgaaaaagttcatcaaatatat
caaaagttccttgatatacctgatattgaccctacactagcatatgtacaatacatgaaa
ttcgcaaggcgcgctgaaggtataaaatcggctagaacggtttttaaaagagctcgcgaa
gacccaagatgtaaacatcatgtatatgttgctgccgcattaatggaatattattgcaca
aaggataaaaatattgcttttcggatattcgaattaggtttaaagaaatttggggacaat
cctgactatatactttgttatatcgattacctgtcacatttgaatgaggacaataataca
agagttttattcgagagagttttatcatctggtagtttagaacctgaaaaatcagtcgat
atatggaaccgatttttagaatttgaatctaatattggagatctagcaagtattgtaaaa
gttgagaaacgacgtagtgctgtattagaaaagatcaaagaatttgaaggtaaggaaaca
gcacaattagtagatagatataaattcttggatctatatccatgtactcctatggagtta
cggtccatcggatatatggaagtgtccagtgttggaagaagtacagttggtgcattacca
cgaataccagatccagaggaagctatagcatcattgccaagacctgatatatcacaaatg
ataccctataaacccaaagtaaatccattacctggagagcatccagtaccaggtggatct
tttccattgccaccagctgcagcacaactttgtaccatgcttcctccacctggatgcttc
agaggaccatttgtggctgttgatttactcatggatgttttcaatcgaattcagttacca
gaccatgctccattgccagtggcggataacggatgtgatacaaaattgtttgacctagcg
aaatccgtacattggatagtcgacgaaagtaacgatggggttagtattggatccaaacgt
agaagaacgcgcttaggtgatgacagcgaggaagaagacttaccaccgccgcctgcaaat
gacatatatcgccaaagacaacaaaaacgagtcaagaaggaaaagtgcagtttgcgcata
tccggcagtgaccgtacttcctggttatgtgggactttattacctatggtgttgacgttt
caggtaactactcaagtaaccagtagtagattctcattgttcttaaggcgtatattcctg
ttcagatcggttctacttgctcgcggcgaaactatcgaaacatag
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