KEGG   Bombus pyrosoma: 122573564
Entry
122573564         CDS       T07776                                 
Name
(RefSeq) protein suppressor of forked
  KO
K14408  cleavage stimulation factor subunit 3
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122573564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpyo03019]
    122573564
Messenger RNA biogenesis [BR:bpyo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     122573564
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C NRDE-2
Other DBs
NCBI-GeneID: 122573564
NCBI-ProteinID: XP_043596032
LinkDB
Position
LG12:6180992..6190117
AA seq 774 aa
MTDDKTEFDWGNEKLQRAQKTVDESSYDLEAWSILIREAQNRPIIEVRPVFEKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINM
EQLWKDYMAFEQNINPIIADKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVGRSTVGALPRIPDPEEAIASLPRPDISQMIPYKPKVNPLPGEHPVPGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPVADNGCDTKLFDLA
KSVHWIVDESNDGVSIGSKRRRTRLGDDSEEEDLPPPPANDIYRQRQQKRVKKEKCSLRI
SGSDRTSWLCGTLLPMVLTFQVTTQVTSSRFSLFLRRIFLFRSVLLARGETIET
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgacagacgataaaacagaatttgattggggaaatgaaaaattacaacgtgctcaaaaa
acggtagatgaatcttcatatgatttggaagcatggagcatccttatcagagaagcacaa
aacagacctattatagaagtaaggccagtttttgaaaaacttgtctctgtgtttccttct
gcaggaagatattggaaaatttacattgagcaagagatgaaaatgcgcaactttgaaaag
gtggaaaagcttttccaaagatgccttatgaaaatcttaaatattgagttgtggaaactt
tacctttcttacgtgaaagaaacaaaagccagtcttgcaacatacaaggaaaaaatggcg
caagcatatgactttgcgctggataaaattggtatggatatccattcctatagtatatgg
aatgattacgttacattccttaaaagtgtagaagctgttggttcatatgctgagaaccag
aaaattagtgctgtgaggaaggtgtatcaaagaggtgtagttaatcctatgataaatatg
gaacaattatggaaagattatatggcttttgaacaaaatattaatccaataattgcggat
aaaatggctattgagcgttctagagattatatgaatgcaagacgagttgccaaagaatta
gaagcggtaacaagaggattgaatcgaagtgctcctagtgtacctccaactggtcatcca
gaagaagttaaacaggttgaattgtggaagaaatatattgcatgggaacgtagtaaccct
ttaagaaccgaagatacttctttagttgctcgcagagtaatgtttgctatagaacagtgt
ttattatgtttgggtcatcatcctgcagtgtggcatcaagctgcacattttctagagctt
agctcaaaaatattaacagagaaaggagatgtaaatgctgcaaagaatttaagcgatgaa
gcagcaacaatgtttgaaagagcaacaagtacattgttgtccaagaatatgttattatac
tttgcgcatgccgattttgaagaaggaagagtaaagtatgaaaaagttcatcaaatatat
caaaagttccttgatatacctgatattgaccctacactagcatatgtacaatacatgaaa
ttcgcaaggcgcgctgaaggtataaaatcggctagaacggtttttaaaagagctcgcgaa
gacccaagatgtaaacatcatgtatatgttgctgccgcattaatggaatattattgcaca
aaggataaaaatattgcttttcggatattcgaattaggtttaaagaaatttggggacaat
cctgactatatactttgttatatcgattacctgtcacatttgaatgaggacaataataca
agagttttattcgagagagttttatcatctggtagtttagaacctgaaaaatcagtcgat
atatggaaccgatttttagaatttgaatctaatattggagatctagcaagtattgtaaaa
gttgagaaacgacgtagtgctgtattagaaaagatcaaagaatttgaaggtaaggaaaca
gcacaattagtagatagatataaattcttggatctatatccatgtactcctatggagtta
cggtccatcggatatatggaagtgtccagtgttggaagaagtacagttggtgcattacca
cgaataccagatccagaggaagctatagcatcattgccaagacctgatatatcacaaatg
ataccctataaacccaaagtaaatccattacctggagagcatccagtaccaggtggatct
tttccattgccaccagctgcagcacaactttgtaccatgcttcctccacctggatgcttc
agaggaccatttgtggctgttgatttactcatggatgttttcaatcgaattcagttacca
gaccatgctccattgccagtggcggataacggatgtgatacaaaattgtttgacctagcg
aaatccgtacattggatagtcgacgaaagtaacgatggggttagtattggatccaaacgt
agaagaacgcgcttaggtgatgacagcgaggaagaagacttaccaccgccgcctgcaaat
gacatatatcgccaaagacaacaaaaacgagtcaagaaggaaaagtgcagtttgcgcata
tccggcagtgaccgtacttcctggttatgtgggactttattacctatggtgttgacgttt
caggtaactactcaagtaaccagtagtagattctcattgttcttaaggcgtatattcctg
ttcagatcggttctacttgctcgcggcgaaactatcgaaacatag

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