Entry |
|
Name |
(RefSeq) probable helicase with zinc finger domain
|
KO |
K25168 | helicase with zinc finger domain [EC:5.6.2.-] |
|
Organism |
|
Brite |
KEGG Orthology (KO) [BR:bpyo00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bpyo03019]
122573610
Messenger RNA biogenesis [BR:bpyo03019]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
122573610
3'-5' decay
Other 3'-5' decay factors
122573610
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG12:4517599..4522240
|
AA seq |
911 aa
MVDHLYRMNGEVKTHFPSGFAEKVQHDWVKSENPETIITCKDTNNVLIFPNKSLCCRSTI
NSVIFCWDFEIMTNGKQLQRVALTLDQNRRNFALKSVMRGTINIGITNGQEWYNSELDNS
NVNENSLKEKHYLVKICFTANKYGTYRQNVMFYFGEYPVIIQKICMDSMPTEDFTRIDEA
TNYQFSQNPKTWNSETCRICWFDSPFVSTKDPKEDKLSMMYPYPNRSNFFLTQESLTDDR
LTPENYRGRLHELITVEELARHEQIARYNEICYMRLHSYYNLNSAGDGSTIAKYAPPGEL
FAQLPLRRRISEDTKSGRLFLRGCNKVLLRSLAQSSNVIYEAYIEDKCTHAVYVRLSKEC
VHALNLTANTYVNVQVQFLLNRLPFCEWHRSVDSLPDIGLVFLNKAHKNMEESSFLNLLG
TNASSFGFSLLNEEQEKALAVITASTNISMPPILLLGPFGTGKTFTIAQALRFLLTKNSE
YKILLCTHSNSAADIYVKEFFDVWYKYENNPRLKPVRIYYEGRSRNTVHPVVQEYSLMKQ
NGTFRNPTEEDLRDCGLIVTTLATSSSLTSLNLLFTHIVIDEAAQALECEVLIPLALATP
QTRLVLAGDQMQLAPEIYSDLASERGLGISLLERIYGMYPQTHPCRIHLHQNYRAHEDII
KFTSEMFYDGIVKSANQTHIEIIQHPTLKPLTFYAVNGVEVQNIQSTGYANMGEVFELVN
RVQELRNNWPTDRWGIYGEKSIGVLVYYAEQVQRIRAELRERRMTDVSVERVLNVQGKQF
TAVFISTVRTRHCCRYSAERNVKDYGFLTNPRLLNTAMTRAKCLVAVVGDPVALFTIGSC
RKLWQRYLEIADLKGIDRETLKYHLSLVPELPLITPLNPLAREFVPRGLCLVEYVAVPMM
YSMFHYPFYPA |
NT seq |
2736 nt +upstreamnt +downstreamnt
atggttgatcacttatatcgaatgaacggagaggttaagacccactttccttccggcttc
gccgagaaggtacagcacgactgggtgaaatcggagaatcctgagacgataataacgtgc
aaggatacaaacaatgtgttaattttccctaataagagtctctgttgccgttcgaccatt
aacagtgtaattttctgttgggactttgagatcatgacgaacggtaaacaattacaaaga
gtagcactaaccttggatcagaatcgcagaaattttgcattgaaatctgttatgcgcggt
actattaatattggaattacgaatggccaggaatggtacaattcagagttggacaattca
aatgtaaacgaaaattcactaaaggaaaagcattatttagtcaaaatttgctttactgcc
aataaatatggcacgtatcgccagaatgtcatgttttactttggagagtatccagtgata
attcaaaagatttgcatggattctatgccaaccgaagactttaccaggattgacgaagcg
accaattatcaattctcacagaatccaaagacatggaatagtgaaacatgccggatttgc
tggtttgattcaccttttgtatcaacgaaagacccaaaggaggacaaactgtccatgatg
tatccatatccaaatagaagcaattttttcttgactcaagaatctctcacggacgatcgt
ttaactccagaaaattatagaggtcgtcttcacgagttaatcacggtggaagagctagct
cgacacgaacagatagctagatataatgaaatctgctacatgcgtcttcatagttactac
aatttgaattctgcaggtgatggatccaccattgccaaatatgcaccaccgggtgaactc
tttgctcagctgccgctaaggcgcagaatctcagaagatacgaaaagcggcaggctgttc
ctgagaggttgcaataaagtactcttgaggagcttagcacaatcgtcgaacgtaatatac
gaagcgtatatagaggataagtgcacgcacgcagtgtacgttagattgtcgaaagagtgt
gtgcacgcgttaaacttgacagccaatacgtatgtaaacgtgcaagttcaattcctattg
aaccggttgcctttctgcgagtggcacaggagcgtggatagtttgcccgacattggccta
gtatttctaaacaaagctcataaaaatatggaagaaagtagttttctaaatttgttaggc
acaaacgcgagcagtttcggattttctttgttgaacgaagaacaggaaaaggcattggcg
gtaataacagcctctactaatatctccatgccaccgatcttgctactaggaccatttgga
actgggaaaacgtttactattgctcaggcgctacgatttttgctgacaaagaactcagaa
tataaaatcctgctctgtacacacagcaacagcgcggcagatatttatgtcaaagaattc
ttcgacgtttggtataaatatgaaaataatccacgattgaaaccagtcagaatctattac
gaaggtagatccaggaacacggtacatccagtggttcaggaatacagtttgatgaaacag
aacggtaccttccgcaatccgacagaggaagaccttagagactgcggtttgatcgtgacc
actttggccacgtctagctctctaaccagcttaaatctattgttcacgcatatagtgatc
gatgaggctgctcaagcattagaatgcgaagtcctcatacctttagccttagctacccca
caaactcgcttagttctggccggcgatcagatgcaacttgcgccagaaatatatagtgat
ctggccagcgaacggggtctgggtataagtttattagaaaggatctatggaatgtaccca
caaactcatccatgccggattcacctgcatcagaattatcgtgctcacgaggacatcatt
aaatttacctcggagatgttctacgacggaatcgtcaagtctgctaaccaaacacacata
gagataatacagcaccccacgttaaagcctttaaccttttatgctgttaatggcgtggaa
gtgcagaacatccagtcgacaggatacgcgaatatgggcgaagtattcgagctggttaac
cgcgtgcaggagctgcgtaacaattggccaacggatcgttggggtatctatggtgagaag
tcaatcggtgtgctcgtctattacgcggagcaggtgcagaggattcgcgcggaactgagg
gaacgcaggatgacggacgtgtcggtggagagagtgttaaacgttcagggaaagcagttc
accgctgtatttatcagcacggtgcgtacccggcactgctgtcgatactccgcggagagg
aacgtgaaggactatggattcttaaccaatcccagacttctgaacactgctatgacacgg
gctaaatgtctggtagcagtggtgggcgatcctgttgctctgttcaccattggttcctgc
aggaagctctggcaaagatacctggagatagctgatttaaaaggcatcgacagggaaact
ctgaagtatcatttgagtctggtacccgagcttccgttgattacaccgctgaacccatta
gcgagggagtttgtacccagaggcctttgtctggtggagtacgtggcggttccaatgatg
tattcgatgttccattatcccttttaccctgcgtaa |