Bombus pyrosoma: 122573936
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Entry
122573936 CDS
T07776
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122573936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122573936
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122573936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
122573936
NCBI-ProteinID:
XP_043596889
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All DBs
Position
LG12:complement(12056342..12059630)
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AA seq
310 aa
AA seq
DB search
MTKMGSQQSPAALQSTVDREKVYAWIIELSNSETRENALLELSKKREVVPDLAPMLWHSF
GTIASLLQEIINIYPAINPATLTAYQSNRVCNALALLQCVASHPETRSSFLQAHVPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRCYLRLS
DNPRALLALRQCLPDQLRDNTFATCLQEDASTKHWLNQLLKNLETGPQPVPPTQPGQQDP
RNIGLSPLAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaatgggttcgcagcaaagtccagccgcgttgcagtcgacggtggatcgcgag
aaggtttacgcctggataatcgaattgtcgaattcggagacgagagagaacgcgttgctg
gaacttagcaagaaacgggaggtagtgcccgatttggctccgatgctttggcattcgttc
ggaacgatcgcgtcgctgcttcaagagataataaacatatatcccgccatcaatccagcc
actctaaccgcgtatcagagcaatcgagtgtgcaacgcgttggctctgttgcagtgcgtt
gccagtcacccggaaaccagatcctcgtttctgcaggctcacgtgccgctgttcttatat
ccgtttctacacacggtcagcaagacccgtccgttcgagtatcttcgattgaccagtttg
ggagtgataggagctttggtaaagaccgacgagcaagaggtgatcacgttcttgctcact
acggagatcatcccgctttgcttacgcatcatggagagcggctccgaattaagcaagacg
gtggctacgttcatcctgcagaagattttactcgacgatagcggtctttcctacatctgc
cagacgtacgatcgattcagtcacgttgccatgattttaggaaagatggtcttatccttg
gccaaagatccttccgccaggctgttgaagcacgtggtcagatgttatctcagactctcg
gacaatccaagggcattactggcgctcagacagtgtttacccgaccagctgagggacaac
acgttcgccacttgtctgcaagaagacgcgtctacgaaacactggttgaaccaactttta
aagaatttagagaccggcccacaacccgtgcctccgacgcaaccgggtcaacaggatcct
agaaatatcggcttgtcgcctcttgcttcctaa
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