Bombus pyrosoma: 122574344
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Entry
122574344 CDS
T07776
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpyo03000
]
122574344
Transcription factors [BR:
bpyo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122574344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
CSRNP_N
DUF3292
DDHD
TFIIA
Motif
Other DBs
NCBI-GeneID:
122574344
NCBI-ProteinID:
XP_043597790
LinkDB
All DBs
Position
LG13:complement(6828691..6945639)
Genome browser
AA seq
504 aa
AA seq
DB search
MLTMESDLKGGSLHGQMPPHPHQGVSPMGHHAGVSPYGTLGSIVHSPALSGSPPSTGGLT
LGLQHHHQTPQHHYASMQAAQQQQQSMHSLAQQSAAQQQQQHHPHQQQQQQQQQQQQPTQ
QHHQAPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWK
LLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGSGVAGVGGMLGV
DQRQVGATGGPQQAQLSRDVYQMPNGYMPNGYMMHDPTAAYQQHVAYGGHMGGAAAAAAA
SAAGYPRYDMGHHMGGGSPSPINSYMNGYGGYGSSSVPGGSPSPYHQAQPGSQISSHSPS
GSSIKSEPTSPASGGIHTPPTGASSSGAAGGQVVKREYMGQQQNQQAQGDLRQMISMYLP
QGVEQGVVQHGAGVYSPGPSPDPLAQHHPAIPPLGHMAESDRKMLNPDTGCYSESVRAWY
RYMWKRYGDQHSNICSWDSYYSEK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagtcggaccttaaaggcggcagcctacacggtcaaatgccacctcat
ccgcatcaaggtgtctcgccgatgggacaccatgccggtgtatcaccgtacggtaccctc
ggttcaatagttcacagtccagcgttatcgggaagtcctccgagtaccggaggcttaaca
ttgggtttgcagcatcatcatcaaaccccgcaacatcactatgcgtcgatgcaggcagcg
caacaacaacaacaaagtatgcattcgctggcgcaacaaagcgctgctcaacaacaacaa
caacatcacccgcaccaacaacagcagcagcaacagcagcagcaacaacaaccgacgcag
caacatcaccaagcgccgaataataataataataccagtaagaacaataacatcgaccgt
gtgaaaaggccaatgaacgcgtttatggtatggtcccgaggccaacggcgtaaaatggca
caagaaaatccaaagatgcacaactcagaaatttcaaagcgattaggtgcagaatggaaa
cttctaagtgaaaccgagaaacgcccgtttatcgatgaagcaaaacgattgcgcgcagta
cacatgaaagaacaccccgactacaaatacagaccgcgacgtaaaacaaaaaccttgttg
aagaaggataaattcccacttggaagcggagtagccggcgtcggaggtatgctaggcgta
gatcagcggcaagtcggtgctactggtggaccgcagcaagcacaattatctcgtgacgtt
tatcaaatgccaaacggctatatgcctaacggatatatgatgcatgacccgactgccgca
tatcaacagcacgttgcgtatggcggtcacatgggaggcgcagcagccgctgctgccgct
tctgctgctggatatcccaggtacgatatgggccatcacatgggcggtggcagtccgagc
cccataaacagctacatgaacggttacggtggttacggcagtagcagcgtaccaggtgga
tctccgtcaccgtaccatcaagcgcaacccggatcgcaaatctccagtcacagtcctagt
ggtagtagtataaaatcagaaccgacgagtccagcgagcggcggaattcacacgccgcca
acgggagcatcgtcgtcaggcgcagctggggggcaagttgtgaaacgggaatacatgggc
caacaacagaatcagcaggcgcagggtgatttgagacaaatgatctcgatgtatctgccc
cagggtgtcgagcaaggagtcgtccagcacggggccggtgtctattcgcccggtccgtca
ccggatccgctggctcagcatcatccagcaatcccaccactcggtcacatggcagagagt
gaccgcaaaatgttgaatccagacaccggctgttactcggagtccgttcgggcatggtac
cgatacatgtggaagaggtacggggatcaacattcaaacatctgttcctgggattcctac
tattcggagaaataa
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