Bombus pyrosoma: 122574595
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Entry
122574595 CDS
T07776
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04140
Autophagy - animal
bpyo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122574595
04148 Efferocytosis
122574595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpyo04131
]
122574595
Membrane trafficking [BR:
bpyo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122574595
Hops complex
122574595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3H2C3
WDR55
zf-RING_5
zf-RING-like
zf_RING_Vps8_fungal
zf-C3HC4
TPR_11
Motif
Other DBs
NCBI-GeneID:
122574595
NCBI-ProteinID:
XP_043598258
LinkDB
All DBs
Position
LG14:complement(3568860..3573613)
Genome browser
AA seq
1093 aa
AA seq
DB search
MMAFLEWRRFNFFDLKKEVDGGKIATALGDAQVTAATSGNGTLVFGDYTGNVHLVNRTYD
VTTFRAYDVTLTLAQQVQHSTFLFTIGEDESGCNPTIKVWNLAKPDKQGNPTCLRISRAI
PSYRAVPATALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVFEHTNFSVTGLAIK
SSGKQTHLFVATPNSVFVYNITVKDQEFKSPLDTMGCARKCSVLAESMQDSHFMIGRDDA
IYCYTPDGRGPCYAAGGQKIMLEWFRSYLVIIAKEAANDPRTTTTISAKPSTIEPIPPGV
DKHVITVLDIQNKCIVFSAPMLSVQAVLSEWGGFFILSGDSKLYHLDEKDLQSKLALLFK
KNLYDISIRIAKNQQYDAEGLVDIFRQYGDHLYSKGDHTGAIEQYIKTIGKLEPSYVIRK
FLDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREIDFDVE
IAIKVCRQASPEDALLLAKKHNRYEWYLRIQIEDKHEYKKALEYMATLDFEEAESNMKKY
GNILIENVPDESTQFLKALCTNYRPSNQPLVDQEMLDGTVDQHIDKANPEDFIHLFLNNS
ERLVEFLEHLVKMNTKWSTLVYNTLVEHYLHIWSALDNDVAKVQYEQKIVRLLQNSEACY
DKDQILILCHQHNFRRGLLFLYEESKLYQEILRFHLREGDSEQILTTCKRFGHQDPNLWV
QALWSVARNKEAPTKLLADILTHIGQERLLSPLMVLDALSTSLSCTLGDVRTYFNSVLRT
EHKQTQADIELSEKYRADTKKIREQIDSIKNSTIIFQGSRCSACHHQLELPSVHFMCQHS
YHQHCFQRFSENENECPACLPDNKKLLDIIKAQEQSKDLHETFHSLLDRAEDPFSLVADY
FGRGVFKKLMVITDSDKMLSASVAKFDESKLNYGPGAEARIRLSEGKNTTLGKTETHRSY
DNYNTVADDRLRSYPKSDLYSSSVEANISGTINDISSPRGNSKKAVPVPIKEARILNSTT
PKSSPVQKSYVPPKTPIVPSNPFGADDYDESKNPFAEDKDDDTTNPFKDNDDTNPFKNND
DDDYNKNLNPFGR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatttctcgagtggagacgcttcaatttttttgatcttaaaaaagaagttgac
ggcgggaaaatagccacggcacttggtgacgcccaagtgacagcagctacgagcggtaat
gggactctagtattcggagattacacaggcaatgtgcatttagtgaatagaacttatgat
gttaccacatttcgcgcttacgatgtcacattaacgctagctcaacaagtccaacattcc
actttcttgttcaccattggcgaagatgaatcaggttgtaatcctaccataaaggtctgg
aatttagctaaaccagataaacaaggcaatccaacatgtcttcgtataagtagagccata
ccaagttatagagcagttcctgcaactgctttatgcgtgcatactagtcttacattaatg
gctattggctttggagatggctctattatgctatataggggtgatttaactagggaaagg
aaaaacaagataaaagtattcgaacataccaatttttcagttactggtttagcaataaaa
tctagtggcaaacaaactcatttatttgttgctacaccaaatagcgttttcgtatataat
attactgttaaggatcaagaatttaaatctcccttggacactatgggctgtgccagaaag
tgtagtgttcttgcagaatctatgcaagatagtcatttcatgattggtcgtgatgatgca
atttattgttacacaccagatggtagaggtccttgttatgcagctggtggtcaaaaaatc
atgttagagtggttcagaagttacctagttattatagcaaaagaagctgcgaatgatcca
agaacaacaactaccatttctgcaaaaccgagtactatagaaccaatacctccaggagtg
gataagcatgtgattacagtacttgatatacaaaacaaatgcattgttttttctgcccca
atgttgtctgtgcaagctgttttatcagaatggggtggattttttatactcagtggagat
agtaaactttatcacttagatgaaaaagacttgcaatcgaaattagcattacttttcaag
aagaatttatatgatatatctataagaatagctaagaatcaacaatatgatgctgaaggt
ttagtcgatatattccgacaatatggcgatcatttatattcaaaaggagatcatactgga
gcgatagaacaatatattaaaactattggaaagttagaaccgtcgtatgtaattagaaaa
tttttagattctcaacacatagataatttaacgacctatttgcaagctttgcataaaaat
gggcaggcaacagaagatcatacaactttgctactgaattgttatacgaaactcaatcat
acagataaattaaaagaatttatcatgacaaaagatagagagattgatttcgatgtcgaa
attgcaataaaagtttgtcgtcaagcatcgccggaggatgctttgctgcttgcaaaaaaa
cataatcgttacgaatggtatcttcgtattcaaatagaagataaacacgagtacaaaaag
gcattagaatatatggctactttggactttgaagaagcagaatccaacatgaagaaatat
ggtaatatcctgatagaaaatgtgccagatgaatcaacgcaatttttaaaagccttatgt
accaattataggccttccaatcaaccacttgtagatcaggaaatgttagatggtactgtg
gaccaacacatcgataaagctaatccagaagattttattcacttgtttttaaataattca
gaacgtctcgtagaattcttagagcacctagtaaaaatgaatactaagtggagcactttg
gtatacaatactttagtagaacattatcttcatatttggtcagctttggataatgatgtg
gcaaaagtacaatatgaacagaaaattgtacgacttttacaaaattcggaagcgtgttac
gataaagatcaaatattaatcttatgccatcagcataatttcaggcgtggtttactcttt
ctttatgaagaaagtaaattataccaagaaatattacgattccatttacgcgaaggagac
agtgaacaaattttaactacgtgcaaacgatttggacatcaagatccgaatttatgggtc
caagctttatggagtgttgcaagaaataaagaagcaccaactaaacttcttgcagacata
ctaacccacataggtcaagaaaggcttttatcaccattgatggttcttgatgcactttct
acttcactttcttgtaccttgggcgatgtgagaacctattttaacagtgtgttacgaaca
gagcataaacaaacacaagcagatatagaattatctgaaaagtatcgagcagatactaaa
aagatacgagaacaaatagattcaattaaaaatagtactattatcttccaaggatcacgt
tgcagtgcgtgtcaccatcagttagaacttccatcagtacattttatgtgtcagcattca
tatcatcaacactgctttcaaagattctcagagaatgaaaatgaatgtccagcttgttta
ccagacaataaaaaattgttggatatcataaaagcacaggaacaatcaaaagatcttcat
gaaacatttcacagtttattggatcgagcagaggatccattctcattagttgctgattac
tttggtcgcggagtttttaaaaagttaatggtaatcacagatagcgataaaatgttgtct
gcgtcggtggcaaagtttgatgaatcaaaattgaattatgggccaggagcggaagccagg
atcagattatcggagggaaagaacacaacgttaggaaaaactgaaactcatcgttcgtat
gataattataatacagtagcggatgatcgactgcgatcttatccaaaatcagatctgtac
tcttcatcagtagaagcgaatatctctggtacaatcaatgacatatctagtccacgagga
aattcgaagaaagctgtgccagtacctataaaggaagctcgtattctaaacagcacgaca
ccaaaatcatcaccagttcaaaaatcgtacgtgccaccaaaaacaccgattgtaccatcg
aatccattcggagcagacgactacgatgaatcgaaaaatccatttgccgaagacaaagac
gatgacactactaatccttttaaagataacgacgacacaaatccctttaagaataatgac
gatgatgactataataagaacctgaatccttttggtagataa
DBGET
integrated database retrieval system
