Bombus pyrosoma: 122574603
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Entry
122574603 CDS
T07776
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04140
Autophagy - animal
bpyo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122574603
04148 Efferocytosis
122574603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpyo04131
]
122574603
Membrane trafficking [BR:
bpyo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
122574603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
zf-RING_5
WDR55
TPR_7
zf_RING_Vps8_fungal
zf-RING_Vps41
Vps39_1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
zf_RING_Vps8
zf-RING_2
Beta-prop_WDR19_1st
PEP5_VPS11_N
zf-C3H2C3
EIF3I
zf-C3HC4_3
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122574603
NCBI-ProteinID:
XP_043598277
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Position
LG14:5118557..5124921
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AA seq
843 aa
AA seq
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MENTSNKEEQNNQNDSDSEIDEVEPRLKYVRVRNDLEHILQNDAASCIAVHPKFLCLGSH
WGMIHLLDHQGNNIQSKSLQAHTVAVNQISIDHNGDFIASCSDDGKVFIYGLYSTENNHN
ISMGRLVKSIAIDPNYYKSCSGRRFITGDDKLVLYEKTFLSRMKLTVLCDAEGGVRSIAW
IGHFVAWASDTGVRIYDLNAKCSLGLIKWIRSTDALPEHYRCNLRWSDDRTLLIGWVDIV
RICQIRKRSIQEMVNRDLPEFVVDPVSTFQVDFYISGIAPLENQLVLLGCLKELDEDGKS
QRPTLHVVEPKHHDFTLVCANSLTLRGYKEYSCNDYHLDCLKEENRFFIVSPKDIVVASL
YDADDRIEWLLSHGKFEQALEAVTLDNGKDCKKYTFVYVGRIYLDHLLSCGKYDEAGKLC
SKILGKDKKLWEEEVYKFARVHQLRSISSYLPRGDVTLDPLIYEMVLYEYLKMDPDGFLQ
LVKEWSPKLYKVAAVVNGVLEHLIVDNQRQNVLLEALAILYIHDEKYDKALAMYLKLRHK
DVFQLIKKYHLYNTVYDMIEGLMDLDAERAIQFFLEKDAVPSDIVVQKLQHNHRYLYLYL
DELNKKDTEDKYHGLLVQLYANYSRDKLLPLLRRSNNYPIQQALDICSQRKFYPEMVYLL
GRIGNTSEALALMTRELNDMQSAIAFCQEHDDEELWNDLIIYSLDKPKAITFLLQKIGTY
VDPRLMVQRMEPSLEIPGLKKALVKMMCDYNLQVSVQEGCRKMLSNDYFNLHERLVKCYQ
KGIFIDDDQMCGACHRKIIVREPRNLVVFYCKHSFHEDCLPNFEVVENCVICNSQKDISP
SRK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacctcgaataaggaagaacagaataatcagaatgattcagactctgaaata
gacgaggtagaacctagactcaaatacgtcagagtacgaaacgatttagaacatatatta
caaaatgatgcagctagttgcattgcagtgcatcctaagttcctatgtctgggttcacac
tggggtatgatacatcttttagatcatcaaggaaataatatacagtctaaaagtttacaa
gcacatacagttgctgtcaatcagatttctatagatcataatggagatttcattgcatcc
tgtagtgatgatggaaaagtttttatatatggtctttatagcacagagaataatcataac
ataagcatgggtcgattagttaaaagtatagctatagatccaaattattataaaagttgt
agcggaagaagatttattacaggggatgataaattggttttgtatgaaaaaacattttta
tccagaatgaaactaactgtattgtgcgatgcggaaggaggagtaagatcaattgcatgg
attggacattttgtggcttgggcatctgatactggtgtcagaatctatgatttaaatgcc
aaatgttcattaggtctcattaagtggatcagatctactgatgcattaccagaacactac
agatgtaatcttcgatggtcagatgatagaacattattaattggttgggttgacatagtg
cgaatttgtcaaattagaaagaggtcgatacaggaaatggttaacagagacttaccggaa
tttgtagtagatccagtttcaactttccaagtggacttttacatttccggtattgcacct
ttagaaaatcagttagtattactaggttgcttgaaagaattggatgaagatggaaagagt
cagaggcccacattacatgttgttgaaccaaagcatcatgattttactcttgtgtgtgca
aattcgcttacacttcgtggttataaagaatacagttgtaatgattatcatttagactgt
ttgaaagaggaaaacaggttttttattgtcagtccaaaagatattgttgtagctagttta
tatgatgcggatgacagaattgagtggctattaagtcatggaaaattcgaacaagcatta
gaggcagtaacattagataatggcaaagattgtaagaaatacacttttgtttatgttggc
cgtatatacttagatcatttgttatcttgtggaaaatatgatgaagcaggaaaactctgc
tctaaaatattaggaaaggataaaaaattatgggaggaagaagtatataaatttgcaaga
gttcaccaactaaggtctatttcttcttatctcccaagaggcgatgtcacattagatcca
ttgatttacgaaatggttctttacgaatatttgaaaatggatcctgatggattccttcaa
ctagtcaaagaatggtctcctaaattatataaagttgcagctgttgtaaatggtgttttg
gaacatcttatcgttgataatcaacgacaaaatgtactgttagaagctttagctattcta
tatattcatgatgaaaaatacgacaaagcattagccatgtatttaaaattgagacataag
gatgtatttcagcttattaaaaaatatcatctgtataataccgtttacgacatgatagaa
ggtttaatggatttagatgcggaacgtgctatacaattttttttagaaaaggatgcagta
ccatctgatattgttgtacaaaaattgcagcataatcatcgatatttatacttgtattta
gatgaattaaataaaaaagatacagaagataaatatcatggattgttagtccagctttat
gctaactattcaagagataaattgttacctcttctacgtcgttctaataattatccaata
caacaagcactagatatctgtagtcagcgaaaattttatccagaaatggtatatctactt
ggtagaattggaaacacttctgaagctttagcacttatgactcgagaattaaacgatatg
cagagtgcgatcgcattttgccaggaacacgatgacgaggaactgtggaatgatttgatt
atttattctctggataagcccaaggctattacatttttgttgcaaaaaataggcacatat
gtcgatcctagacttatggtacaaagaatggaaccgtctttagaaattcctggtttaaag
aaagctttagttaagatgatgtgtgactacaatctccaagtgtcagtacaagagggatgt
agaaaaatgttatccaatgattatttcaatttacatgaaaggctagttaaatgttatcaa
aaagggatatttatagatgatgaccaaatgtgtggagcttgccataggaaaataattgta
agagaaccaaggaatctagttgtattttattgtaaacattcgtttcatgaagattgtcta
ccaaatttcgaggtagtggaaaattgtgttatatgtaactcgcaaaaagatatatctcct
agcagaaaatga
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