Bombus pyrosoma: 122574649
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Entry
122574649 CDS
T07776
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04140
Autophagy - animal
bpyo04142
Lysosome biogenesis
bpyo04145
Phagocytosis
bpyo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122574649
04142 Lysosome biogenesis
122574649
04140 Autophagy - animal
122574649
04148 Efferocytosis
122574649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpyo04131
]
122574649
Membrane trafficking [BR:
bpyo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122574649
Hops complex
122574649
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3H2C3
zf_RING_Vps8
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf_RING_Vps8_fungal
COMP
zf-RING_Vps41
zf-RING_16
Occludin_ELL
SAM_7
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122574649
NCBI-ProteinID:
XP_043598389
LinkDB
All DBs
Position
LG14:7674696..7680348
Genome browser
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVYTPPIRPDISTAGFIQMKFLDDGPIFIKQKVNFLPPDKILHL
VVNNNIIVIAMANNLLLRIDMKHPDSPEEIDISKYAMNMEMSRMFLDPLGNHLLISLVPK
SQDSPNPPPELFYLHRKTTKLKQAGKFKGHEITAIGWNFSNSSETTTGPILLGTSKGLIF
ETEIGLDGDKIFNTSLEQYWRQLPNYLPLYGAKEVEGLVFDIGKDSKPPITGLEFHKIPN
TDKYVIIVTTLMRIYQYIGAVQNPEEKPLLQQIFNKYLNVQESFNEVINNLPYSKIQFYY
PSLGILPKSFGWLTEPGIFYAQIDPKIDPKSVLTNQQMLICPEASLMGINTSQTSTPPLS
FVLTEFHALLLYTDRVKGMSLLNQDLIFEDIYNDAVGGLLNITKDYATRSIWAYSERAVF
KYKVNKEDRNVWQIYVDKGEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYA
DTHSSFEVISLKFLQEWQIDALKTFLKKKLEGLKTQDKTQITMIVVWVIELFMNQMGVLR
SNNTSYLHDPQYLELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNYLDALEVLKSQNNKELFYQFAGILLQELPRPAMTALISQGSLLKPS
KLLPALVSCNSDEKHAKEIIRYLEFCVYKQSCQEQAIHNFLLSLYARYKRDEVMRYISSQ
GQDINMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTINVDLAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDIVRIEDILPFFSDFVTIDHFKDAI
CNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQEFRTRCTFINTKDTCNTCGVQLLLRPF
YVFPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNRPEDTRSVRSVSLSTKDQ
IKADIDDLIASECLYCGELMIESIDKPFIEEEDYERVMKEWI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgaacaagcatctcaaagatcaaaacaagtatataca
ccaccaattcgtccagatattagtactgctggatttatccaaatgaaatttctagatgat
ggcccaatttttattaagcaaaaagtaaattttctaccaccagacaaaattttacatctt
gttgttaacaataatatcattgttattgccatggctaataatctcctcttacgtattgac
atgaaacatccagattcacctgaagagatcgatatatctaaatatgcaatgaatatggaa
atgtcaagaatgtttcttgatcctttaggtaatcacttgttgatatctctagttccaaaa
tctcaagattctcctaaccctccccctgaattattttatttacacagaaaaacaacaaaa
ttaaaacaggcaggtaaattcaaaggacatgagattactgccattggatggaacttttca
aattcttccgaaactactacaggtccaattctcttaggaacttcaaaaggcctcattttt
gaaacagaaattggtttagatggtgataaaatatttaatacaagcctggaacaatattgg
cgtcagcttcctaactatttacctctttatggtgctaaagaggtagaaggattggtattt
gatatagggaaagatagtaaaccaccaattactggtttggagtttcataaaataccaaat
actgacaaatatgtgattattgttactactcttatgcgaatttatcaatatattggagca
gtacaaaatccagaagaaaaacctttattacaacaaatttttaacaaatatttgaatgta
caagagagcttcaatgaagtaataaataatttgccttattctaaaattcaattttattat
ccttcacttggtattttaccaaaatcatttggttggttaactgaacctggtatattttat
gctcagattgatccaaaaatagatccaaaaagtgtgttaacaaatcaacaaatgttaatt
tgtcctgaggcaagtctaatggggatcaatacctcacaaacaagtactccaccattatct
tttgttttaacagaatttcatgccttattactttatacagaccgtgtaaaaggcatgtcg
cttttgaatcaggatttgatattcgaagacatttataatgatgcagtgggaggattactt
aatattactaaagattatgcaacacgttccatatgggcttatagtgaaagagcagtattt
aaatataaagttaataaagaagatagaaatgtttggcagatctacgttgataaaggtgaa
tttgaacttgcaaaacaatattgtaaagataatccagcacatatagatcaagtgcttgta
aagcaagcagaaatgctttttaagaataaggaatatgaaaaaagtgctctcatctatgca
gatactcattcgtcatttgaagtaatttccttaaaatttctacaggaatggcaaatagac
gctttaaagacatttcttaaaaagaaacttgaaggattaaaaacacaagataaaacgcaa
ataaccatgattgttgtatgggtaattgaactatttatgaatcaaatgggtgtattacgg
agtaacaatacatcgtatttacatgatccacaatatctagaattacaaaaacaatttgat
agctttcttgcaataccaaaagttgaggaatgtataaaaagaaatcgtagcactatatat
gatttaatggcaagtcatggtgataaagacaatcttattcgtttaactataatgcattgc
aactatgaagaagtgatacgtcagcatttatataaaaataattatttagatgctcttgaa
gttctgaaaagccaaaataataaagagctattttatcagtttgctggtattcttttacaa
gaattaccacgccctgcaatgactgctctaatatcacaaggatctttattaaagccatct
aagcttctaccagctttagtatcttgtaatagtgatgaaaaacatgcaaaagaaataatc
agatacctagaattttgcgtttataaacaaagttgtcaagaacaggcaattcataatttt
ctattatctttatatgctcgttataaacgagacgaagtaatgcgttatattagctctcaa
ggacaagatataaatatggtacattatgatgtgcattatgcattacgattgtgccaagag
gttggcttaacagaagcttgtgtacagttgtctgctttgcttgggttgtggacaacagca
gttgatttagctttaacaatcaatgttgatcttgctaaacaaatagctgctatgccctct
gatcatgatgatgaattaaggaaaaagttatggttgaaaattgctgaacacgtagttcga
gaaaaagatgacatacaacaagcaatggaatttttgcagcattgcgatatagtcagaata
gaagatatattacctttcttttcagattttgttactatagatcacttcaaggatgctatt
tgcaattcattgcaggaatataatcaacatattcaagatttaaaggaagaaatgcaagaa
gcaacaaaagcggcagaacttattaggaaagatatacaagagtttagaacgaggtgcaca
tttataaatacaaaagatacatgtaatacttgtggtgttcaattactattacgacctttt
tacgtatttccatgtggacacagatttcatagtgattgccttgtagctgcattaacgcct
atgttgtcaatggatcagagaacgaagctagctgatcttcaaagacaactcactgctctt
tcaaatagacctgaagatactagatcagtcagatctgtatctttatctacaaaagaccaa
atcaaggctgatattgatgacttaatagcatctgaatgtttatattgtggagaactaatg
atagagtctatagataaaccatttattgaagaagaggactatgagagagtgatgaaagaa
tggatatga
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