Bombus pyrosoma: 122574953
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Entry
122574953 CDS
T07776
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122574953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122574953
03009 Ribosome biogenesis [BR:
bpyo03009
]
122574953
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122574953
Spliceosome [BR:
bpyo03041
]
Complex A
U1 snRNP components
U1 related factors
122574953
Complex B
122574953
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
Pre-60S particles
Helicases
122574953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
122574953
NCBI-ProteinID:
XP_043599158
LinkDB
All DBs
Position
LG14:complement(9915890..9920463)
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AA seq
641 aa
AA seq
DB search
MVRVSIKENHRNSDFEAISIFMRMAYRDRERSDRRGGGGVRGGGRFGGRDGSSGSGRFGS
NSNRDSSFGNNNFKNRQPGERLRKPRWDMGTLPPFRKDFYQPHPNVTTRSSHLVEAYRSD
KEITVKGTNVPGPNIFFEEGGFPEYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQ
TGSGKTLAYILPAIVHINHQPRLNRNDGPIALILAPTRELAQQIQQVASDFGISSQVRNT
CIFGGAPKGPQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFE
PQIRKIVEQIRPDRQTLMWSATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDV
CEEYEKEGKLMKLLEEISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQE
RDYVLNQFRNSRSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTG
TAYAFFTPGNAHKASDLIQVLEEAKQVVNPKLYELSRNPGIYKRGRYGGRSGGGGGRGSG
GRGGTSRGSRGGRDGERGGRFDRSNGGGGDRGNKWNGNNSSITSNKNCGVGGGNYNSKAF
SQNNYGGGSGGGSSGYSQNGGYGGSGGGGGGGSNYRQQNGY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtacgtgtttctattaaggaaaatcaccgtaattctgattttgaagcaataagtatc
tttatgagaatggcgtatcgcgatcgtgaacgtagtgatagaagaggaggaggaggagta
cgcggaggaggtcgttttggtggtcgagatggaagtagtggaagtgggagatttggtagt
aattccaatagagatagtagttttggaaacaataattttaaaaaccggcaacctggagaa
cggcttcgtaaaccaagatgggatatgggtacattaccaccatttaggaaagatttctat
caacctcatcctaatgttacaactcgaagttcacatttagttgaagcttatcgttcagat
aaagaaattactgtaaaaggaacaaatgtgccagggccaaatatattttttgaggaaggt
ggatttccagagtatgtgttaaatgaaattcgtagacaaggttttggagaaccaactgca
attcaggcacaagggtggcctattgctttatctggacgtgatatggttggaattgctcaa
actgggtctgggaaaacattagcatatattttaccagcaatagtacatataaatcatcaa
ccaagattaaatagaaatgatggtcctatagctttgattttagcaccaacaagagaactt
gcacagcaaattcaacaagttgcatcagattttggtatctcgtcacaagtaagaaataca
tgtatttttggtggagctccaaaaggccctcaagctcgtgatcttgaacgaggtgttgaa
atttgcatagcaacacctggacgacttattgactttctagaacgtggtacaacaaattta
cgtagatgcacgtacttagtacttgatgaggctgacagaatgcttgacatgggttttgag
ccacaaattagaaaaattgtagaacaaatccgacctgatcgacaaactcttatgtggtca
gcaacatggccaaaggaagttcgcaatcttgcagaagaatttttaactgactatatacaa
attaatattggttctctacaattagctgctaatcataatattcttcaaattgttgatgta
tgtgaagaatatgaaaaagagggtaaacttatgaaacttttagaagaaatatcaaatgaa
ccagagaataaaactattattttcgttgaaactaagaggaaagtagatgatataacacgt
gcaattaataggtatggatggcaagcaattggcatccatggagataaaagccaacaagaa
agagattatgtattaaatcagttccggaatagcagatctgccattctagtagctacagac
gttgcagcaagaggattagatgtggaagatgttaagtttgtgataaatttggattatcca
tccaattctgaagactatgtacaccggattggtcgtacaggacgttcacagcgtacggga
actgcgtacgcatttttcactcctggtaacgcacacaaggctagtgacttaattcaagtt
ttagaagaagcaaaacaagttgtaaatcccaaactatatgaattatcgaggaatccaggc
atttataaaagaggtcgttatgggggacgtagtggaggtggtggaggacgtggttctggg
ggccgtggcggcacttcccgtggttcgcgtggtggtcgcgacggagagagaggtggcaga
tttgatcgttctaatggcggtggaggagatcgaggaaataaatggaatggtaataatagc
agtataacgtcaaataaaaattgtggtgtgggaggaggcaactacaatagtaaagcattt
tctcaaaacaattatggaggggggtctggtggtggttccagcggttatagtcaaaatggt
ggatatggaggcagtggaggaggaggtggaggtggcagtaattatagacaacaaaatggc
tattaa
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