Bombus pyrosoma: 122575539
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Entry
122575539 CDS
T07776
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122575539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122575539
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122575539
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122575539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
122575539
NCBI-ProteinID:
XP_043600529
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All DBs
Position
LG15:complement(4693633..4694842)
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AA seq
198 aa
AA seq
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MDKDKDIIVCVPGQRLCVSDKFNIAGPGTYEQQGYIYSKLVGVVKLIKKENIRTIEVHGI
TEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQM
YKCFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMIPINWTQMQCPKTLR
KEFRKVAKVVPEHVIAEQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagataaagacattatcgtatgcgtgccaggacagaggttatgtgtctccgac
aaatttaatattgctggaccaggaacttatgagcaacaaggctatatctattcgaaattg
gttggtgtagtaaaattaataaaaaaagaaaatattcgtaccatagaagtccatggaata
acagaacaaagcattgttcctgcacctggtgatattgtaacagctatggttactattgtt
aatcaaagattttgtaaatgtagtataaaatgtataggtgacattgtattgacaagacct
tacagaggaattttaaggaaagaagatgttcgtgcaatagataaagataatattcaaatg
tataagtgctttagacctggagatattattcttgcaagagttatgccaatgacagaagca
catacttatcaactaagtacagcagaaaatgaattaggtgtagtgatagcacatagtgag
gaaggtgtagctatgatacccattaattggacacaaatgcaatgtcctaaaacattgcga
aaagaattcaggaaagtagcaaaagttgtgccagaacatgttattgcagaacaataa
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