Bombus pyrosoma: 122575562
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Entry
122575562 CDS
T07776
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122575562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122575562
03009 Ribosome biogenesis [BR:
bpyo03009
]
122575562
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122575562
Spliceosome [BR:
bpyo03041
]
Complex A
U2 snRNP components
U2 related factors
122575562
Complex B
122575562
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122575562
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
90S particles
Helicases
122575562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
SRP54
AAA_19
nSTAND3
T2SSE
AAA_7
Flavi_DEAD
ABC_tran
AAA_25
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
122575562
NCBI-ProteinID:
XP_043600582
LinkDB
All DBs
Position
LG15:complement(10383072..10388047)
Genome browser
AA seq
718 aa
AA seq
DB search
MSKRRIEVVDPYIKRKADGSATSNSTTIPSTAPKNQVQLNPYTGLPFTPRYHELYKKRIT
LPVFEYRTDFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSRRIDNKGVACTQPRRVAA
MSVAQRVSEEMDVPLGVEVGYSIRFEDCSSPKTILKYMTDGMLLREGMSDPMLDAYQVIL
LDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTPEPERDYLEAAIRTVIQIHMCEEVAGDLLLFLTGQEEIEEACKRIKREMDNLGP
EVGELKCIPLYSTLPPNLQQRIFEPAPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDNT
YPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFA
HIDGDHLTLLNVYHAFKQNFEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFCLKRTST
DFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSSCLDHKPEWVIYNE
FVLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQAKLDSKQYQEGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaaggatcgaggttgtggatccgtatattaaacggaaagcagatggctcg
gctacatcgaatagcacaactataccttcgacagcaccaaaaaatcaagttcagctaaat
ccttatactggtctaccttttacaccaagatatcatgaactttataaaaagagaattact
ttaccagtatttgaatatcgtactgattttatgaggttattggcacaacatcaatgtatt
gtactcgttggagaaacaggttctggaaaaactacacaaataccacaatggtgtgtagaa
tattcaaggcgtattgacaacaagggtgttgcttgtactcagccaaggagagtagcagct
atgtctgttgcacaaagagtttcagaagaaatggatgttccattaggtgtggaagtaggg
tacagtattcgttttgaagattgtagttctccgaaaactatattgaagtatatgactgat
ggtatgctgttgcgtgaaggcatgtcagatcccatgcttgatgcttaccaagtgatatta
ttagatgaagctcatgaaagaactttagccacagatttgcttatgggtgtgttaaaagaa
gtgattaaacaaagaccggatttgaaacttgtgattatgagtgcaactttagatgctgga
aaatttcaacagtattttgataatgcacccttaatgaacgtacctggccgaactcaccct
gttgaaattttttatacacctgagcctgaaagggattacttagaggctgctatcaggaca
gttattcaaattcatatgtgtgaagaagtagcaggagatttgctcctctttttaactggt
caagaggaaattgaagaagcttgtaaaagaatcaaaagggagatggataatttaggtcca
gaagtaggtgaacttaaatgtataccactctattctacactgcctccaaaccttcaacaa
agaatctttgaaccagcaccacctacaaagcctaacggtgctattggtagaaaagtagta
gtttcaacgaatattgcggaaacgtcgttaactatcgacggtgtcgtctttgtgatagat
cctggatttgcgaaacagaaggtatacaatcccagaattcgtgtagaatctctccttgta
tcacccattagtaaagcatctgcacagcaaagagctggtagagctggtcgcacaaggcct
ggaaaatgtttcagattgtatacggagaaagcatataaaaacgagatgcaagataatact
tatcctgaaattttaagatcaaatcttggcagtgttgtattgcaactgaaaaagcttggc
attgacgacttggttcattttgattttatggaccctcctgcaccagaaactcttatgagg
gctttagaacttcttaattatttggctgctttagacgatgatggaaatctcacagatttg
ggtgccgtgatggcagaatttccattagatcctcaattggcaaaaatgctcattgcatct
tgcaatcataactgcagtaatgagatattaagcattactgctatgttgtcagtcccgcag
tgttttgtgaggccaaatgaatcaaaaaaagctgcggatgatgctaaaatgcgatttgca
catatcgacggagatcatttaacgttactgaatgtttaccacgcttttaaacaaaatttc
gaagatccacaatggtgttacgataacttcgtcaattaccgatctttaaaaagtggggat
aatgttaggcaacaactaagtagaataatggatagattttgtttaaaacgtacctctaca
gacttcacatcaaaagattattatatcaacattagaaaagcccttgtgaacggtttcttt
atgcaggttgctcatttagaaaggaccggtcattatttgactattaaagataatcaaatt
gtacaacttcatccaagcagttgtttggatcataaacccgaatgggtaatttataacgag
ttcgtgcttacgaccaaaaattatatcagaacagttacagatattaagcctgattggttg
cttaaaatagcaccacaatattatgatttacaaaacttcccacaatgtgaagcaaagaga
caattggaagtgatccaagcgaaattagattcgaaacagtatcaggaaggattctaa
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