Bombus pyrosoma: 122575664
Help
Entry
122575664 CDS
T07776
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03020
RNA polymerase
bpyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122575664
09124 Replication and repair
03420 Nucleotide excision repair
122575664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122575664
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122575664
Enzymes [BR:
bpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122575664
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122575664
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122575664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122575664
NCBI-ProteinID:
XP_043600894
LinkDB
All DBs
Position
LG15:10721717..10726313
Genome browser
AA seq
1175 aa
AA seq
DB search
MYSLEDDQYDDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLLIVEGQTLLLKKRHIDMLKERDYNNDGWQELVGSG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPEADDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMVA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtattctctggaagatgatcaatacgacgatgaagatgcagaagaaatttcgtcaaaa
ctttggcaggaagcctgttggattgttattaatgcctattttgatgaaaaaggtcttgtg
agacaacaacttgatagttttgatgaatttattgaaatgtcagttcaaagaattgttgaa
gactcaccacaaattgatttacaagcagaagcacaacatacttcgggcgaaatagaaaat
ccagttagacacttactgaaatttgaacaaatttatttgtctaagcctacacattgggaa
aaagatggagctccatctcctatgatgcctaatgaggcaagactaagaaatttgacatat
tctgcaccactgtatgtagatataactaaaacaattgtaaaagatggagaagatcctatt
gaaactcaacatcaaaagacatttataggaaagattccaattatgttgagatcaaaatat
tgtttacttgctggcttatctgatcgtgatttaacagaattgaatgaatgtccattagat
cctggaggctattttattattaatggttcagagaaagtgctgattgcacaagaaaaaatg
gcaacaaatactgtttatgtctttagtatgaaagacggtaaatatgcatataaatcagaa
attcgatcttgtttggaacatagttcacgtcctacatctacattgtggattaatatgatg
gcaaagagtggagctagtattaaaaagtctgctataggtcaacgtattattgcaattatc
ccatacattaaacaagaaattcctattatgattgtattccgtgcacttggatttgtagct
gatcgtgatattttagaacatatcatatatgattttgatgatcctgaaatgatggaaatg
gtaaaaccttccttagatgaggcatttgtaatacaagaacaaaacgtggctctaaatttt
attggtactagaggtgcaagacctggagtaactaaagaaaagcgtattaaatatgctaga
gaaattttacaaaaggagatgcttccacatgtaggcataagtgatttttgtgaaaccaaa
aaggcttactttcttgggtacatggtgcaccgtttattatcagcctctttaggtcgaaga
gaattagatgatcgagatcactatggtaataaaagattagacctagctggtccattattg
gcattcctatttaggggactatttaaaaatttaatgaaagaagtgcgattgtatgcacag
aaattcatagataggggaaaagattttaaccttgaacttgccataaaaactaaaattatt
actgatggcttgagatactcacttgctacaggaaattggggagatcaaaaaaaggctcat
caagctagagctggtgtatcacaagtattgaacaggttgacatttgcttcaacactatca
catttaagaagagtgaattctccaattggaagagatggaaaattggccaagccgcgtcaa
ttacataatacgttatggggtatgttatgtcctgcagaaacccctgaaggtgccgcagtt
ggtctagtaaaaaatttagcactgatggcttacattagcgttggatctcaaccttcgcca
attcttgaattcttagaggaatggtctatggaaaatttagaagaaattgcaccaagtgca
atagctgatgcaacaaaaatattcgtaaatggttgttgggttggtattcacagagaccca
gatcaattaatggctactttacgtaaattaagaagacaaatggacattattgtatcagaa
gtatctatgataagagatattagagatcgtgaaatcagaatatatacagatgcaggaaga
atcagtaggcctttattaattgttgaaggacaaaccttattattaaagaaaagacatatt
gacatgttaaaagaaagagattacaataatgatggctggcaagaattagttggtagcgga
gttgttgaatatattgatactttagaagaggaaactgttatgattgcaatgtcccctgaa
gatttgaggcaagaaaaggaatatgcatattgtacaacatatacacattgtgaaattcat
ccagcaatgattctgggagtgtgtgcctctattattccattccctgatcacaatcaaagt
ccaagaaatacttatcaaagtgctatgggtaaacaagctatgggagtatatattacaaac
tttcatgttcgaatggatactttggcacatgtactatattatcctcataaacctttagtg
actaccagatctatggaataccttaggtttcgtgaacttccagctggaattaacagtata
gttgctatattatgttatactggttataatcaagaagacagtgtcattttaaatgctagt
gctgttgagagaggtttctttagatctgtattctatagatcctataaagattcagaatcc
aagagaattggagatcaagaagagcaatttgaaaaacctacacgccaaacttgtcaaggg
atgcgtaatgctatttatgataaattagatgatgatggaattattgctcctggaattcgc
gtatccggagatgatgtagttataggtaaaactattactcttccagaagcagatgatgag
ttagatagtactacaaaacgttttacaaaacgggatgcatcaacctttttacgtaatagt
gaaactgggatagtagatcaagtaatgttaactttgaacagtgaaggatataaattttgt
aaaatacgcgtacgcagcgttcgtattccacaaattggtgataaatttgcttctcggcat
ggacaaaaaggtacctgcggaattcaatacagacaagaagatatgccattttcatgtgaa
ggtctcacgccagacattataatcaatcctcatgctatcccatcgcgtatgactattggt
cacttaattgagtgtatacaggggaaggtgtctgctaataaaggtgaaattggcgatgct
actccatttaatgacgctgtaaatgtacagaaaatttctacacttttacaagaatatggt
tatcaactgagagggaatgaagtcatgtataatggtcacactggccgcaagataaatgct
caagtctttttaggaccaacttattatcaacgtttgaaacatatggtggatgataaaatt
catagtagagctcggggacccgtacaaattttagttagacagcctatggaaggaagggca
agagatggaggtttacgatttggtgaaatggaacgtgattgtcaaatttcccatggagct
gcacaatttctaagagaacgtttattcgaagtatcagatccatatcggatacatatatgt
aacttttgtggtttaatcgcaatagccaatttgaggaataatacatttgaatgcaaagga
tgtaaaaacaaaacacaaatttctcaaattaggctaccatatgcggcaaaattacttttc
caagaacttatggctatgaatattgctcctcgattaatggtcgcataa
DBGET
integrated database retrieval system
