Bombus pyrosoma: 122575925
Help
Entry
122575925 CDS
T07776
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122575925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpyo04121
]
122575925
Enzymes [BR:
bpyo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122575925
Ubiquitin system [BR:
bpyo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122575925
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122575925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
zf-C3HC4_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EML
zf-C3HC4
Beta-prop_WDR90_POC16_2nd
zf-RING_2
ANAPC4_WD40
WD40_like
zf-RING_UBOX
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_Vps41
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
WD40_RFWD3
zf-rbx1
KIF21A
Prok-RING_4
U-box
PUMA_CC
zf-RING_10
zf-ANAPC11
Polyhedrin
DUF1664
Sina_RING
Motif
Other DBs
NCBI-GeneID:
122575925
NCBI-ProteinID:
XP_043601380
LinkDB
All DBs
Position
LG15:complement(9035356..9044415)
Genome browser
AA seq
704 aa
AA seq
DB search
MYLKIIKCILRNIIQLRKKMSAINDSNLGNDIPGSSGDVGECSGRMSKQNHSANVLHRIS
GTLEDKNNDYLCPICLEVIDEAHITRCGHTFCYRCIIKSLEANGRCPKCSYALTQQDIFP
NFLLHELISKYKTRIKGLAELGSSYAADGRHRVVGTDLSIPAHDGLRDIIAAESANLTLP
DVNVMLEVLTQRKHLLEAETCTAQNKLLHEFLKHLLQQKEEQKNQLQKEIALIKKDMEEV
ENILRDVQNKCPKVEDLKKSSENDTAQVSAIRKEMIGLIDIIDSNMVKPNEKASVVGSET
FINPTGSKKQNDYAVGSTLAVRRKRMHAHFDDFVQCYFDSRAKELLLGHKSHSQSDSWQG
TSSGLDVFRENLVKFSRYKALRPLATLNYSSDIFNNSTIVSSIEFDKDNEFFAIAGVTKR
IKVFDYSAVIRDTVDIHYPCVEMVSSSKISCVSWNSFHKGMLASSDYEGIVTVWDAATCQ
RTKTFQEHEKRCWSVDFNDVDTKLIASGSDDARVKLWSLNNDHSVASLEAKANVCCVKFN
PRSSCHLAFGSADHCVHYYDLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKM
WNINNPHCLRSFVGHVNEKNFIGLTTDGDYVACGSENNALYVYYKGLSKQLFSYKFDAVR
SILEIQERREEDLNEFVSAVCWKQMSNVVVAANSQGTIKILELI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgaaaataattaaatgtattctaagaaatattattcaattgaggaaaaagatg
tcagctatcaatgatagtaatttgggaaatgatattcctggaagcagcggagatgtaggt
gaatgtagtggtagaatgagtaaacaaaatcactcagcaaatgttcttcatagaattagt
ggtacacttgaagataaaaataatgattatctatgtcctatttgtcttgaagtaattgat
gaagctcatatcacacgttgtggtcatacattttgttatcgttgtataataaagtctttg
gaagccaatggtcgttgtccaaagtgtagctatgcgttaactcaacaagatatttttcca
aactttctattacatgaattgatatcaaaatataaaactagaattaagggtcttgctgaa
ttaggatcttcttatgcagctgatggtagacacagagtagtaggtacagatttatctata
ccagcacatgatggtttaagagatattatagctgcagaaagtgctaatctaacattacca
gatgtaaatgtaatgctagaagtactaacacaaagaaaacatttactggaagcagaaaca
tgtacagcacaaaataaattgctacatgaatttttgaagcatctattgcaacaaaaagaa
gaacaaaagaatcagttacaaaaagagatagcattgattaagaaggatatggaagaagtt
gagaatattctaagagatgttcaaaataaatgtcctaaagtagaagatttgaaaaaatcc
agtgagaatgatactgcacaggtatcagctataagaaaagaaatgattggtcttatagat
ataattgattcgaacatggtaaaaccaaatgaaaaagcaagtgttgttggaagcgaaacc
tttattaatcctacaggaagtaaaaaacaaaatgattatgcagtaggatctactttagct
gtacgtagaaagaggatgcatgctcattttgatgattttgttcaatgctatttcgattct
cgtgctaaggaactactccttgggcataaatctcacagtcaaagtgattcatggcaaggt
actagttcaggacttgatgtttttagagaaaaccttgttaaattctctagatataaagca
ttacgtccattagcaactttgaattattcgtcggatatttttaataactccactattgtt
tcaagcattgaattcgataaagataatgaattttttgctatagctggagttacaaaacgt
ataaaagtatttgattatagtgctgtaataagagacactgtagatatacattacccctgt
gttgaaatggtatctagctccaaaatatcatgtgtttcatggaactcctttcataaagga
atgctagcatcatctgattatgaaggaattgtaacagtatgggatgctgcaacttgtcag
agaaccaaaacatttcaagaacatgaaaaaagatgttggtctgttgattttaatgatgta
gatactaaacttatagcatcaggttcagatgatgctagagtgaagttatggtctttgaac
aatgatcattccgtggcttctttagaagcaaaagctaatgtgtgttgtgtaaaatttaac
ccacgtagttcatgtcacttggcatttggatctgcagaccattgtgtccattattatgat
ttacgtaatatgaaggaagcactctgtattttcaaaggccaccgtaaagctgtttcatat
gttaaattcattaacaaagaagaaatagtatctgcaagcacggattcgcaattaaaaatg
tggaatatcaataatccacattgtctacgttcattcgtcggacatgtaaacgagaagaat
tttataggtcttactaccgacggtgattatgtagcatgtgggtcagaaaataatgcactt
tatgtgtactacaaaggactttccaaacaattgttctcatataaatttgatgctgttcga
agtatattagaaatacaagaaagaagagaagaagatctgaatgaatttgtgtctgcagtt
tgctggaaacaaatgtccaatgttgtggtagcagcaaattctcaagggactattaaaata
ttagaactaatttaa
DBGET
integrated database retrieval system
