Bombus pyrosoma: 122576211
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Entry
122576211 CDS
T07776
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03008
Ribosome biogenesis in eukaryotes
bpyo03013
Nucleocytoplasmic transport
bpyo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122576211
03015 mRNA surveillance pathway
122576211
03008 Ribosome biogenesis in eukaryotes
122576211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122576211
03009 Ribosome biogenesis [BR:
bpyo03009
]
122576211
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122576211
mRNA cycle factors
Stress granule specific factors
122576211
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122576211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
UBA_8
UBA_4
LRR_8
NTF2
LRR_4
Motif
Other DBs
NCBI-GeneID:
122576211
NCBI-ProteinID:
XP_043602085
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Position
LG16:2670622..2672619
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AA seq
524 aa
AA seq
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MQRTSLPIVPMQLDSSIAIKISMGGSMFQERTLMGRSDVWHKVKILKGTQYSRESVLKAI
LSAIEPAELIPVKYQASGEDTFFLARNCAHALDKLCKTNLIIKNPDGDPLILIVTLGFAS
IQDLKLNIQPLILTALTKMYNSNRKTLDLSEFHKDSEMSDTVYCPLSQQRTFCHVLKLTK
TSIAKVEHLNLQKNELFNLIPIETSGLTSIKYLDLRYNNLISMEALTPLKNLCILKLWLD
GNPLCENYSSSKQYIDSAMKYCPNLFQLDGVYIRTSGLPLTYANYFRNESREGLVTKFVN
HFFALYDQRDRTVLRGLYCKNAFYSMSLAIPAAVAHKRNLVQFTASRNLLKNVDSNKKRQ
QHLYYGQDNILVGLKRLPRSYHDRNSFVLDIMYDDGKCLAISVCGLLRTISTTSQILWFN
RTFIIQAGPDHEYNIINDQYLVDSTIQEIPPNSIEGRFHDDVVPSCFSASEKKELLAKFV
EATRLNTDWCQTYLEEAKWDIRKAISNFMKDYKSSAVPNEAFQK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaacaagtttgccaattgtaccaatgcaactggattcttccattgctataaaa
ataagcatgggaggatctatgttccaagaaaggacattaatgggtcgttcagatgtatgg
cacaaagttaaaattctgaaaggaactcaatacagcagagaaagtgtattgaaagccata
ttgagtgctatcgaaccagcagaattgatccctgttaagtatcaagccagtggagaagat
accttttttttggcacgtaattgtgctcatgctttggacaagctatgcaagactaactta
ataatcaaaaatccagatggagatccactgatcttgatcgtaactttaggatttgcatcc
attcaagatctgaaactcaatattcagccattgatcttaactgctttgacgaagatgtac
aattctaatagaaaaaccttagacttgtcagagtttcataaagattctgaaatgtctgac
acggtatattgtcctttatctcaacagagaactttttgtcatgttttaaaattaacaaag
acttcaattgccaaggtagagcacttgaatcttcagaaaaacgaactgttcaacctaatt
cctatagaaacttctggtttaacttccataaagtatctggatttaaggtacaataacttg
atatctatggaagcactcactcctttaaaaaatctgtgtatactgaagttatggttagat
ggaaatcctctctgcgaaaattactctagttctaaacagtatatagactctgctatgaaa
tactgtcccaatttgtttcaattggatggagtttacattagaacatctggtctaccactc
acgtatgctaattactttagaaatgaatctagggaagggttagtcaccaaatttgtcaac
cactttttcgctctgtacgatcagagggatagaacagtcctgagaggattatattgtaaa
aatgcgttttattctatgagcttggcgattccagcagctgtagctcataaacggaacctc
gttcaatttacagcgagtagaaatttattaaaaaatgtggattcaaataaaaaacggcaa
cagcatctttattacggacaagataatattctagttggtctaaagagattaccacgatcc
tatcacgatagaaattcttttgtattggatataatgtatgacgatggcaaatgcttagca
atctcagtttgcggactattgaggaccattagcaccacatcgcaaattctatggttcaac
agaacgttcattattcaagctggtcctgatcatgaatacaatatcataaatgatcagtac
ctagtagattctactatacaagaaattccaccaaatagcatagaaggaagatttcacgac
gacgtcgtgccatcgtgctttagtgcaagcgagaaaaaagagttgctagccaaatttgta
gaagcgaccaggttgaacaccgattggtgtcagacttatttagaagaagctaagtgggac
ataagaaaagcaatttcgaattttatgaaggactataaatcttccgccgttcctaacgaa
gcatttcaaaaataa
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