Bombus pyrosoma: 122576311
Help
Entry
122576311 CDS
T07776
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpyo03009
]
122576311
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
90S particles
Other 90S particles
122576311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
S1
S1_RRP5
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
Suf
OB_RRP5_4th
TPR_14
TPR_19
UTP6_C
ARM_TT21_N
TPR_2
TPR_15
TPR_6
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
122576311
NCBI-ProteinID:
XP_043602364
LinkDB
All DBs
Position
LG16:2827250..2832020
Genome browser
AA seq
1391 aa
AA seq
DB search
MTLKNFPRGGKEVQKRKPSDLLFDKYEKIGKRNREKQRAKKQDEEELNFVPNTAERLSYA
TISEGLVVLGCISEVTNYDLLISLPGGLLGRAQITDISECYTNLLQSLVKSQDSQTNEFK
SLPELYTHGDYVVCYVKAIQSQEISQISISLEPSLINQSLGVTNLDSGSKIVCTISSIED
HGYVVDTGLINVRAFIPTKESGNEKCLFPGKQLLCYVKEVKTNENTSTITLTLKQKLVKA
ICETEIKSLDSLMPGTKFNLSIKKVLSNGLCVSLDENNIGFINQTYLDEPLSKYSNSLKI
TGTLLYILPTIKFAYFSSTIDKNRNNIIKPGDIVEEATVLFRESGGIVLQLTKSGIRGFV
SFKRTSVEFDKIIEKFAPGTTHKCRILSYSWLDGIYICTMQHSLLEQKYFSLSDFKPGDV
VNVKITNIDKVNGFVNVQHGKFNGQIAPDHISDEGLSALKKLKVDKEVEARVLFVHIGRK
KVYLTLKRSLITSDLPILANIQDAKIDSKHHATIIQIHKRGILVKFFGDVKGWIPHTALD
TETSKVNWNYSIGQTILVKIQTVNTDSEKIILNVANQDIQVEKATFDVGEEVEGTIIESS
TQGLYLRISKNEGQTVSTGFLPAGHMSPCMEIAALLASKYVPGDKLSALVFATVPNLILT
RTFVTQGRYRNFEKLKMGDCIPCTIKDMEPDGIRLILPVAECMPFGYVSYSNVSNFNLLH
TNQILMAKILSINKKEQQLGLTLSLKKIYDDLSDPKSRMVAALDTLVLYFNKLVELSRNS
YYKNRPIASVKLGQRVSGKIEKITADGLVVQLQNNLLGIVSRDHYSENKKIGDKISGTII
WKNYVHELVELTTLSSIMHKISAKQNKQIQFPDGKLLRGRILMVTNWFILVFLQGIGKGT
LAAIPVRRHINDLQPDLTPYTIHSKIKCYALLNSEESDIMPICIIKSAFEKKYCVREKSG
DNSNLKRKKQNQENVVLAKKIKIERLPEVPKMENKGKRSREKSENDLEKEYSKTMCVEQT
EEGKIELEDTKPSKKNLRYALKNVNNDKDSEQKPRTSACGFFWDDNPDLTLLQDKESSSD
SEDELEEKPKLKNKKLSAAERREQERQKEREIRQREEALANKLLPNSVDQFDRLVLASPD
SSIVWLQYMAYHLQTTEIEKARAVARRAVKTINFREENEKLNVWNAWLNLESKFGIPESL
NDVFQEAVRSNDSLKIYNHMLTVHVEAGRQIELEKTINTMIGKFKHIPEIWFNCGEALVK
MGLKDKSRHIMQRALQSLPASEHVNLMARFAIMENKFGDKERAQTLFEQILSSYPKRVDI
WSCYIDSLVKSNDIDIARKVLERAVVQTLPPRKMKILFKKFMNLEEQYGTQEDVIRVQQM
AVEYVEKQCTK
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaaaaactttccaagaggtggaaaagaagtacaaaaaagaaaaccatcggat
ttgttatttgacaaatatgagaaaattggtaaaaggaatcgtgagaaacagagagcaaag
aaacaagacgaagaggaactaaattttgttcccaacactgcagaacgattatcatatgca
acaatatctgaaggattagtggtattaggatgtatttctgaagtgacaaactacgatttg
ctgatatctttgccaggcggcttactaggtcgtgcccaaattacagatatcagtgaatgt
tacacaaatttgttgcaaagtttggtcaaatcacaagattctcagactaatgaatttaag
tcccttcctgagttatatacccatggagattatgtcgtatgttatgtaaaagctatacaa
tcgcaagagatatcgcaaatttcgatatctcttgagcccagtctgataaatcaaagttta
ggtgttactaatttagatagtggctcaaaaatagtatgtactattagtagtatagaagat
catggttatgtggtcgatacaggtttaataaacgtaagagcgtttattcctactaaggaa
agtggcaatgaaaaatgtttgtttccaggtaaacagcttctatgctatgttaaagaagtt
aaaactaatgagaatacatcaacgattacattaactttgaaacagaagcttgttaaggct
atttgtgaaacagaaattaaatcattggacagcttgatgccaggcacaaaatttaatctt
tctataaagaaagttttgtctaatggtttatgtgtttcattagatgaaaacaatatagga
ttcataaatcaaacatatttagatgagcccttatctaaatactcaaatagtctgaaaatt
actggaacattattatatattttgccgaccatcaaatttgcatacttcagctcgacgata
gataaaaatagaaacaatattattaagcctggagatattgtagaagaagctactgttcta
ttcagagaatctggtggaatagtactacaattaactaagagtggaatacgcggattcgtt
tcctttaaaagaacaagcgttgaattcgataaaatcattgaaaaatttgcacctggtacc
acacataaatgtagaatattatcatacagctggttagatggaatttatatttgtaccatg
cagcattcactgttggaacagaagtacttttcattgtctgattttaaacctggtgatgtg
gtaaatgtaaagattacaaacattgataaagtgaatggtttcgttaatgtacaacatggt
aaatttaatgggcaaattgcaccagatcatatatctgatgagggtttaagtgccttgaag
aagctgaaagtcgacaaggaagtagaagcaagagttttgttcgttcatataggccgaaaa
aaagtatatcttactttgaaaagatctttaataacgagtgacttgcccattttagcaaac
atacaagacgcgaaaattgactcgaaacaccacgcaactatcattcaaatacataagcgt
ggaatattggtaaaatttttcggggatgttaaaggttggattccacatactgctctcgac
acggaaacatctaaagtaaattggaactattcaattggccaaacaattttggtaaaaatt
cagacagtgaacacagattcggaaaaaataattctaaatgtggctaatcaggacatacaa
gttgaaaaagcaacattcgatgttggtgaagaagtagaaggcacaataatagaatcatcg
actcaaggattgtatttaagaatcagtaaaaatgaaggacaaaccgttagtacaggattt
ttaccagctggtcacatgtcaccttgtatggagatagcagctctactagcatcaaaatat
gttcctggtgataaactttcagctcttgtatttgctacagtacctaatttaattttaact
aggacttttgtaactcaaggaagatacagaaattttgaaaaactgaaaatgggagactgt
ataccttgtacgatcaaagatatggagccagatggtataagactaattttaccagttgca
gaatgtatgccatttggatatgtgtcctatagtaacgttagtaattttaatctactgcac
acgaaccaaattttaatggcaaaaatactttctattaacaagaaagaacaacaattagga
ctaacattgtcgctaaagaaaatatatgatgatctatctgatcctaaaagtagaatggtg
gcagcattggatacattggtcctgtattttaataaattagtagaactttcaaggaattca
tattacaaaaacagaccaattgcatctgtaaaattagggcagagggttagtggaaagatt
gaaaaaattacagctgatggtttggttgttcaattgcagaataacttgctaggtatagtg
tctagggatcattactctgaaaataaaaaaataggggacaaaatttctgggacgattata
tggaaaaattacgtacacgagcttgtcgaattgaccacgttatcgtcaataatgcataaa
ataagtgccaaacaaaataagcaaatacaattccctgatggcaaattgctacgtggtaga
atcttaatggtgacaaattggtttattttggtattcctacaaggtattggtaaaggaact
ttagctgcgatacctgtacgtcgtcacataaatgatttacagccagatctaacaccttat
actattcattctaaaatcaaatgttacgccttattaaattccgaagaatccgatattatg
cctatttgcatcataaaatctgcatttgaaaagaagtattgtgtgagagagaaatcgggt
gataatagtaacttgaaaagaaagaaacaaaatcaagagaacgtggtactcgccaaaaaa
ataaaaattgaaaggttaccggaagtaccaaagatggaaaacaaagggaaacgaagcaga
gaaaaatcagagaatgatttagaaaaggaatattcaaagacaatgtgtgttgaacaaaca
gaagaaggaaagattgaactggaagataccaaaccttccaaaaaaaatttaagatacgca
cttaaaaatgttaataatgataaggatagcgagcagaagccaaggacatctgcgtgtgga
tttttctgggatgacaaccctgatctaactctccttcaggataaagagtcatctagcgat
agtgaagatgaattagaggaaaaaccaaagctgaaaaataagaaattaagcgctgctgaa
cgtcgagaacaagaaagacagaaggaacgtgaaattcgtcaaagagaagaagcgcttgcc
aataaactgttaccaaattctgtagatcagttcgacagattagttttagctagtccagac
agttcaatagtatggttacagtatatggcataccatttacagacgacagaaatcgagaaa
gcaagagcagttgcgagaagagcggtgaaaacgattaatttcagggaagagaatgaaaaa
ttaaacgtttggaatgcttggttgaatttagagtctaaatttggaattcctgaatcattg
aatgatgtttttcaagaggcagtaaggtctaacgattcactaaaaatatacaatcacatg
ttgactgttcatgtcgaggctggcaggcagatcgaactagagaaaacaattaataccatg
attggaaagtttaaacatatccccgaaatatggtttaattgtggagaagctttggtaaaa
atgggtttgaaggacaaatcaaggcatattatgcaaagagcattgcaatctttgccagca
tctgaacatgtaaatctaatggcaaggtttgcgattatggagaacaaatttggggataaa
gagagagcacaaactctgtttgagcaaattctaagttcctatccgaaacgggtggatata
tggtcttgttatattgattccctagttaaatctaatgatattgatatagcaagaaaagtt
ctagagagagcagttgttcagacgttaccacctagaaaaatgaagatcctgtttaaaaag
tttatgaatttggaagaacagtatggtactcaggaagacgtgattcgtgttcaacaaatg
gctgtagaatatgtagagaagcagtgtacaaaatga
DBGET
integrated database retrieval system
