Bombus pyrosoma: 122576539
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Entry
122576539 CDS
T07776
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122576539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122576539
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122576539
Spliceosome [BR:
bpyo03041
]
Complex C
Other components
Step II factors
122576539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
AAA_16
Motif
Other DBs
NCBI-GeneID:
122576539
NCBI-ProteinID:
XP_043602916
LinkDB
All DBs
Position
LG16:complement(3408483..3413236)
Genome browser
AA seq
1197 aa
AA seq
DB search
MDEVAKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLAEKNDTFDKFKKVLIENGAEFS
ESFMANLLRIIQHMKPTKLEEKSLKPPTKQDELAQKFPALALPNEEPKIVDEKELKDDDI
VSSAMASLEELAPSKKSNKEDSKKENQSIDNNDKKNKHTRRSRSRDRRRHRSRSSGRRDR
RHRSRSRSRSRDRSRSRDRRRHRSRDRKRSRSRDRKFHRDKYSNKLDRSRSRSVEELSMD
PEVGKIYSGKVANIVPFGCFVQLEGLKRRWEGLVHISQLRREGRVASASDVVSRGQKVLV
KVLNIGGQKVSLSMKDVDQETGRDLNPVVAVTKTEEDEKHLRNPDRPTSLLELQGNWDED
ETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDTETGILPREDDEEEDVEIELVEE
EPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSVPTG
LNKNWIDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQRQS
LPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM
SVAKRVAEEFGCRLGQEVGYTIRFEDCTGPETNIKYMTDGMLLRECLMDLDLKTYSVIML
DEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFEV
EVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDV
PELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV
YNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTN
LATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMAEFP
LEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLT
LLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQ
KAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMRE
VTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgcaaagctcgaacatctgtctttggtttcaaaaatatgcacggaattg
gaaaatcacttaggactaaatgacaaagatttggctgaattcataatccatttggcagag
aaaaatgatacatttgataaatttaaaaaagttctcattgaaaatggcgctgaattttct
gaatcttttatggccaatttgttaagaataatacagcatatgaagccaactaaactggaa
gagaaatcattaaaacctccgacaaagcaagatgaattagctcaaaaattccctgcccta
gcactgccaaacgaggaaccaaaaattgtggatgagaaagaactcaaagacgatgatata
gtcagcagtgctatggcaagtttggaggaactagcaccatcaaaaaagtcgaacaaggaa
gatagcaagaaagaaaaccaatcaatcgataataatgataagaagaacaaacacacaaga
agaagtagatcaagagatagaagaagacacagatcacgttcatcaggtcgcagagacaga
aggcataggtctagatctcgttcaaggtcacgagatcgttcaagatccagagatagaaga
cgtcacaggtccagagatcgtaaaagatctagatcacgagacaggaaatttcatagggac
aaatattccaataaacttgatcgatctagatcgcgatctgtagaggaactttccatggat
ccagaagtaggcaagatttattcaggcaaagtagctaatattgtaccttttggttgtttt
gttcaattggaaggtttgaaacgaaggtgggaagggcttgttcatatctcacaattaaga
agggaaggaagagtcgccagtgctagcgatgtagtatctagaggccagaaggtgctcgtg
aaagtcctcaatattggtggacaaaaggtttctttaagtatgaaggatgttgatcaggaa
accggcagggatctgaatcctgttgtggctgttaccaaaactgaagaagatgagaaacat
ttgagaaatccagataggcctacttccttgttagaactccagggtaattgggacgaagac
gaaacttattctagaaaacgtgtgcagagattgtcttctccagaaaagtgggaaattaaa
caaatgcttgctgcatcttgtatcgataggagtgaattgccagaattcgataccgaaaca
ggaatcctcccacgagaagacgatgaagaagaagacgttgaaatagagttagtggaagaa
gagccaccatttttacatggccatggaagagctcttggagacttaagtcctgttcgcata
gtaaaaaatcctgatggttctttagcgcaagctgcaatgatgcagagtgctttagcaaag
gaaaggagggaacaaaaaatgttgcaaagagaacaggaaatggattctgttccaacaggt
ttgaacaaaaattggattgaccctctaccagaagctgaaagtagaactctagctgcgaac
atgcgtggaatcggccttcaaacacaagatttgcctgagtggaagaaacacgtgatagga
ggaaaaaagtcttcctttggaaagaaaacaaatttaactcttcttgaacagcgtcagagc
ttaccaatatataaactcagggatgatttagttaaagctgtgacggataatcaaatttta
atcgtaattggagaaacagggtcaggaaagaccacgcaaattacacagtatttagcagaa
gcaggattcacagcccgtggaaagatcggctgtactcaacctagaagagtggctgccatg
tcggttgctaaaagagtggcggaagaattcggttgtcgtttaggacaagaagttggctac
acgattcgttttgaagactgtactggtccagaaaccaacataaagtatatgactgatggt
atgttgctaagagaatgtctcatggatttggatttgaagacatactctgtaattatgttg
gatgaggcacatgaacgtaccattcacacggacgttctttttggattgctgaaacaagct
gtagggagaaggccagatttaaaactaatcgttacaagtgcaactttggatgctgtcaaa
ttttcacaatacttcttcgaggcaccaattttcactattcctggtagaacattcgaagtt
gaagtcatgtataccaaagaaccagaaacagactatctggatgccgcactgataacagta
atgcagatacatttgagagaacctccaggagacatacttctattcctaactggtcaagaa
gaaatcgacacagcttgtgaaattttatacgaacgtatgaaatctttaggccctgatgtt
ccagagttaatcattttgcccgtgtattcggcgcttccttcggagatgcagacgagaata
tttgaaccagctccacctggttccagaaaagtggtaatagccaccaatatagcggaaact
agtttgactatcgatggaatttattacgtagttgatccaggatttgtgaaacagaaggtc
tataattctaaaactggaatggatagtcttatagtaacaccaataagtcaagcagctgcg
aaacaaagagcagggagggctggcagaactggtccaggaaaatgttatagactttatacc
gaaagggcttatagggacgaaatgcttccgacgccggttccagaaatccaacgtactaat
ttagcaaccacggtattacagttaaagactatgggcatcaatgatctattacactttgat
tttatggatgctccacctgtcgaatcgttgattatggctttagaatctctacatagctta
agtgcattagataacgaaggtttgttaaccagattaggaagaaggatggcagagtttcct
ctagaacctaatttatctaaaatgcttattatgagcgtacatcttcaatgttctgatgag
atattgaccatcgtcagcatgttatctgttcagaacgtcttctacagaccgaaagataag
caagctttagcagatcaaaagaaagcaaaattcaaccaaccggaaggcgatcatttaact
ctgttggcagtttataactcctggagaaataataaatttagtaatgcatggtgttatgaa
aattttgtgcaaattagaactttaaaacgcgctcaggatgttcgaaaacaactattaggt
ataatggacagacacaaattggacgtagtatctgcgggtaaaaacactgtaagaattcag
aaagctgtttgttctggtttcttcagaaacgccgcaaagaaagatcctcaagaaggctat
agaaccttggtagatagccaagttgtctacattcatccaagtagcgcgttatttaacaga
caaccagaatgggtaatttatcatgaattggtccaaactacgaaagaatacatgagggaa
gtgacaactatagacccaaaatggttagtagagtttgcgccagcatttttcaaatttagc
gatccgaccaaacttagcaagttcaagaagaatcaaagattggaaccactttataataag
tacgaagaaccgaacgcttggcgaatatcaagggttcgaagaagacgtaattaa
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integrated database retrieval system
