Bombus pyrosoma: 122576981
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Entry
122576981 CDS
T07776
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122576981
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122576981
Spliceosome [BR:
bpyo03041
]
Complex C
Other components
Complex C specific factors
122576981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122576981
NCBI-ProteinID:
XP_043603904
LinkDB
All DBs
Position
LG2:5497371..5506542
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AA seq
684 aa
AA seq
DB search
MNTKPTFSKPGDSMWQEDKPDTEAHSSTQFVYNAHHSLALNMQRQRLPTFKYRSHIIYLL
EKYQTLVLIGETGCGKSTQLPQYLLEAGWCTDGKMIGITEPRRVAATSLSNRVADERNCI
LGTEVGYSIRFDNYTDETTKIKYMTEGILLRELMSDPLLTSYSVIVVDEVHERTLLTDII
MGLLKKIIRKRKSLRIVVCSATVDAEQLRDFFNTNTTKDSAKDTAIILTVEGRLYPVDIF
YIIEPVANYVTSVIDTALKIHENEEPGDILAFLTGLDEVDQAVSLLSEHAKLIKEGKQKL
LPLAMYGSLPNSEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWYEA
ETQTNSLVIVPVSKASANQRAGRAGRVRTGKAYRLYTKEAYSELFEATPPEMQRSDLAPA
ILQLKALGIDNVLRFNFPSAPPSKNLLTGLELLYALGAIDSNGELTTPLGVTMAEMPLEP
VLAKSLIVSGEMGCSEELSTILAMLQVQNVFVRPAGGQAAIKARIAHRKFEVEEGDLLTL
LNVYTAYEKNRTLSWCQKQFLNNKALRRVTEIRTQMHSMMKKLDIPLVSANGNLQQILKC
ITAGLFPKAAYLHYTGVYKTVRGNKDLYIHPNSCLYTLQQPQWLLFYEVLQTNKTYIKDI
TVIQPEWLLELAPHFYEKTSLDPI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaccgactttttctaaacctggtgatagtatgtggcaagaggataaacca
gatacagaagcccattcgtccacacaatttgtatacaatgcgcatcattcgcttgcactt
aatatgcaacgtcaacgattgcctacatttaagtatagaagtcacattatatacttactg
gaaaaatatcaaacattagtcttaatcggtgaaactggatgtggaaagagtacgcagtta
cctcagtatcttcttgaagcaggatggtgtacagatgggaaaatgattggcatcacggaa
ccaagaagggttgcggctacatctttatctaatcgtgttgctgatgaacgcaattgtatt
ttaggcaccgaagttggttattctatacgtttcgataattatacggatgaaacgacaaag
atcaagtatatgacagagggaattctgcttcgtgaattaatgagcgatcctttgttgaca
agttattctgtaatcgtggtggatgaagtacatgaaaggacccttcttacggatattatt
atgggacttctgaaaaaaataatccggaaacgaaaaagtttacgaattgtcgtttgttcc
gctacggtcgatgcagaacagcttcgagattttttcaatacaaatacaacgaaggattcc
gcaaaagatactgcaattatacttaccgtcgaaggtagactttatccagtggatattttc
tacattatagagccagtagctaattacgtgaccagtgtcatagatactgctttgaagatt
cacgaaaatgaagaacctggtgatattctagcgtttcttacgggtttggacgaagtagac
caagcagtttctcttttatcagagcatgcaaagctcataaaggaaggcaagcagaaactt
ttacctctggctatgtacggatctcttccgaactcagaacaactgaaagtattttggagg
gctgccaaagacactcgtaaagttatcgtagccacaaacattgcagaaacatctatcact
attccaaatattgtttatgttattgattgtggctttgtaaaaattccatggtatgaggct
gaaactcagacaaattctctcgtaattgttcctgtgtccaaagcatccgcgaatcaacgt
gctggtcgagcgggtcgtgtccgaacaggaaaagcatacagattgtacacaaaggaagca
tactcagaactatttgaggcaacgccgccagaaatgcaacgctcggatttagcaccggcg
atcttacaattgaaagctttaggaattgataatgtattaagatttaattttccttctgct
ccaccaagtaaaaatcttcttactggactggaattactttatgcattaggagcaattgac
agtaatggagaattaacgacaccattgggcgtaacaatggcagaaatgccattggagcct
gttttggcaaaatctcttatagtatcaggtgaaatgggatgttccgaagaattatcaacg
attttagctatgcttcaagtacaaaatgtttttgtaagacctgcaggaggccaagctgct
ataaaggcaagaatagcgcatagaaaattcgaagttgaggagggagacttattaacgttg
ctcaatgtatataccgcttatgagaaaaatagaacacttagttggtgtcaaaaacagttt
cttaataacaaagctttacgcagagttacggaaattcgaacgcaaatgcattctatgatg
aagaaattagatataccgttggtttcggctaatggaaatttacaacaaattctaaaatgt
ataactgctggactttttccgaaagcggcgtacttgcattacactggagtatataaaaca
gtacgtggaaataaggatttgtatatacatccaaatagctgtttatatacacttcagcaa
cctcaatggctactattttacgaagttttgcaaacaaacaaaacgtatataaaggacata
actgtgatacaaccagagtggttattagaattagcgcctcacttttatgaaaaaacatct
cttgatcctatttaa
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