Bombus pyrosoma: 122577677
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Entry
122577677 CDS
T07776
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03022
Basal transcription factors
bpyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122577677
09124 Replication and repair
03420 Nucleotide excision repair
122577677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122577677
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122577677
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122577677
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122577677
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122577677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
122577677
NCBI-ProteinID:
XP_043605071
LinkDB
All DBs
Position
LG2:complement(13564001..13567807)
Genome browser
AA seq
759 aa
AA seq
DB search
MKISVDGLLVYFPYDYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETESKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQFMPPGIYSIDDL
KEYGRDRNWCPYFLTRFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE
TDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQESPAAFLRD
VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPVILVTHLATLVSTYTKGFTIIVEP
FDDKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIRACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRMDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEYGKIGQKAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgttgacggcttgcttgtatattttccttacgactacatttatccagaa
caatatgcatacatgctcgagctcaaacgtagcctggatgctaaagggcactgtttattg
gaaatgccatcgggcactggcaaaactataactttgttatcattaattgtagcatatatg
ttggaaaatccattggatgtgacaaaattaatttattgttcccgtactgtaccagaaata
gagaaagtcatagaagaattaaaaaagcttatggattattatgaaaaagaaacagaaagt
aaacctaaaattgttggcttagttcttagttcacgaaaaaatatgtgtattcatccagag
gtaagcagagaacgtgaaggcaaaattgttgatggtcgttgtcattctctcacagcatca
tatgttcgtgagagacataactatgatgaatcaacaccaatttgtaatttttatgaagga
tttgatatggaaggcaaagaacaatttatgccaccaggcatatattctattgatgatttg
aaagaatatggaagagaccgcaattggtgtccatattttcttacacggtttacaatttta
catgcccagattgtagtgtacagttatcattatttattagatcccaaaattgcagaaact
gtgtcaaaagaattaagcaaaagttctgtagtagtatttgatgaagcccacaatatagat
aatgtatgcattgattcaatgagtgtaaaaattaatagaagaactttagaaaaaagttca
gctaatatacaacttcttgaaaaaaccgtggctgagatgagagaggatgatgtaaataaa
ttaaaagaagaatatgagagattagtagaaggattaaaagatgcacatgttgcaagagaa
acagatattatcttagctaatcctgtcttaccagatgaaattttgcaagaggtggtccct
ggtaatattaggaatgcagaacattttgtcggttttttaagacgattcgtagaatattta
aaaacgcgtctacgtgtgcaacacgtagttcaagaatcacctgctgcgtttctaagagat
gttcaaacaaaagtttcaatagaacgtaaaccattaaggttttgtgcagaacgactagct
tctcttttacgtactatggaaataaccgatttaactgatttttcaccagttatattagtg
acacatctggcaacattagtatctacatatacaaaaggatttacaattattgtagagcca
tttgatgacaaaacacctaatgttttaaatccaattcttcatttcgtttgcttagattcg
tccattgcaataaaacctatatttgatagatttcagtcagtagtaattacttcaggaaca
ttgtctccattagacatgtatcctaaaattttaaattttcatccagtcataatgtcatct
tttactatgacattagccagaccttgtctcttaccgatgattgtagcgaaaggtaacgac
caagttgcaatttcgtcaaagtatgaaacaagagaagatgttgctgttataagaaattat
ggtcaactattagttgaattcgcagctactgttcccgatggtttagtttgcttttttact
tcctacttatacatggaatctgtcgttgctgcatggtatgaccaaggtgtggtagatcaa
cttcaaagacacaaattactatttattgaaactcaggattctgcagaaacgagtttagct
cttataaattacatacgagcatgtgaaaatggaagaggtgctgttctcctttctgtggca
cgtggtaaagtatcagaaggagttgattttgatcatcatttgggaagagctgttttgatg
tttggaattccttatgtgtatacacaatcgcgtattttaaaagcacgactagaatatctt
cgtgatcaatttcaaatcagagaaaatgattttttaacttttgatgcaatgagacacgca
gcacaatgcgttggaagagcaattagaggaaaaactgattacggtataatggtatttgca
gacaagaggttttcgagaatggataaacgaagtaagttaccaaaatggatacaagaacat
ttaactgatagtttatgtaatttatcaaccgaggaagctgtgcagataagtaaacgttgg
ttacgacaaatggctcaaccatttacacgtgaaaatcagttgggattatccctattgaca
cgagaacaacttgaaaaagaagaatatggcaaaattggacagaaggcgcaacaaaattag
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